| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2571 |
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| Symbol | lysS |
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| ID | 6282977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2905648 |
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| End bp | 2907204 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642622130 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001896190 |
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| Protein GI | 187924548 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.158431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0253603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC CGACCCAGCC TAATGCGGCC CAGCCTGACG CGGCCCGACC CAACGTCGCG
CCTGAGATGG ACGACAACAA GATCATGACC GAGCGCCGCG AAAAGCTGCG CGAACTGCGT
GAGCAAGGCG TCGCCTATCC GAACGATTTC CGCCCCACGC ATCACGCGGA AGATCTGCAA
TCGCAATACG AGCAATCCGA CAAGGAAGCG CTCGAAGCGA ATCCGCTCGA AGTCGCGATT
GCCGGCCGCA TGATGCTCAA GCGCGTGATG GGCAAGGCGA GCTTCGCGAC CGTGCGCGAC
GGTTCGGGTC AGATCCAGTT CTTCATCACG CCCACCGACG TCGGCCAGGA AACGTACGAC
GCCTTCAAGA AGTGGGACAT GGGCGACATC GTCGCGGCGC GCGGCGTGCT GTTCCGCACC
AACAAGGGCG AACTCTCGGT GCGCTGCACG GAGCTGCGTC TGCTGTCGAA GTCGCTGCGT
CCGCTGCCGG ACAAGTTCCA CGGTCTCGCC GACCAGGAAA TGAAGTACCG CCAGCGATAT
GTCGATCTGA TCGTCACGCC GGAAACGCGC AAGACTTTCG TCGCGCGCAC CAAGGCGATT
TCGTCGATCC GCAAGTTCAT GGCCGAGGCC GACTTCATGG AAGTCGAAAC GCCCATGCTG
CACCCCATTC CGGGTGGCGC GGCGGCCAAG CCGTTCACCA CGCACCACAA CGCGCTCGAC
ATGCAGATGT TCCTGCGCAT CGCACCGGAG CTGTATCTGA AGCGGCTGGT GGTCGGCGGC
TTCGAGCGTG TGTTCGAGAT CAACCGTAAC TTCCGCAATG AGGGCGTGTC CGTGCGCCAC
AATCCGGAAT TCACGATGAT CGAGTTCTAC GCCGCGTACA CCGATTACAA GTGGCTGATG
GACTTCACCG AACAGCTGAT CCGTCAGGCG GCGATCGATG CTTTGGGTAC CGCCACGATC
ACGTACCAGG GCCGCGAACT CGATCTGGCG AAGCCGTTCC ATCGCCTCAC GATCACGCAA
GCCATCCAGA AGTACGCGCC TCAATATACG AACGAGCAAC TCGCCGACAG CGCCTTCCTG
CGCACCGAGT TGAAGAAGTT CGGCGTGGAT GCGTCGCAGC CGCAGTTTCT GAACGCGGGC
GTCGGTTCGC TGCAGTTGGC ATTGTTCGAA GAAACCGCCG AGTCGCAATT GTGGGAGCCG
ACGTACATCA TCGACTACCC GATCGAGGTT TCGCCGCTGG CGCGCGCGTC GGACAAGGTC
GCAGGCATTA CCGAGCGTTT CGAGCTGTTC ATCACGGGCC GCGAGATCGC CAACGGCTTC
TCGGAGCTGA ACGATCCGGA AGACCAGGCA GCGCGCTTCA AGAAGCAGGT CGACCAGAAA
GAAGCCGGCG ACGAAGAAGC GATGTTCTAT GACGCGGACT ACATTCGCGC GCTCGAATAC
GGCATGCCGC CGGCCGGCGG TTGCGGCATC GGCATCGACC GTCTGGTCAT GATGCTGACC
GACAGCCCGA GCATCCGGGA TGTGATTCTG TTCCCGCATC TGCGTCGCGA AGACTGA
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| Protein sequence | MTEPTQPNAA QPDAARPNVA PEMDDNKIMT ERREKLRELR EQGVAYPNDF RPTHHAEDLQ
SQYEQSDKEA LEANPLEVAI AGRMMLKRVM GKASFATVRD GSGQIQFFIT PTDVGQETYD
AFKKWDMGDI VAARGVLFRT NKGELSVRCT ELRLLSKSLR PLPDKFHGLA DQEMKYRQRY
VDLIVTPETR KTFVARTKAI SSIRKFMAEA DFMEVETPML HPIPGGAAAK PFTTHHNALD
MQMFLRIAPE LYLKRLVVGG FERVFEINRN FRNEGVSVRH NPEFTMIEFY AAYTDYKWLM
DFTEQLIRQA AIDALGTATI TYQGRELDLA KPFHRLTITQ AIQKYAPQYT NEQLADSAFL
RTELKKFGVD ASQPQFLNAG VGSLQLALFE ETAESQLWEP TYIIDYPIEV SPLARASDKV
AGITERFELF ITGREIANGF SELNDPEDQA ARFKKQVDQK EAGDEEAMFY DADYIRALEY
GMPPAGGCGI GIDRLVMMLT DSPSIRDVIL FPHLRRED
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