| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2570 |
|---|
| Symbol | |
|---|
| ID | 6282976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 2904245 |
|---|
| End bp | 2905498 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642622129 |
|---|
| Product | peptide chain release factor 2 |
|---|
| Protein accession | YP_001896189 |
|---|
| Protein GI | 187924547 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1186] Protein chain release factor B |
|---|
| TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0324776 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0245297 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCGGCCG TCCCAACCCC CGTCGACCTA AAACCCCGAA AATCTCCGCA AAATCAACCG
CAAACACGCG CCGGATCGCT CAACAGCCAC CGGCGTGGCG TACCGATCGG CTATAATTTC
TCCTTTTTAC GAAGCTATAA AAGATCGACA TGGAAGCGGA ACGTCTCAAC GCGATCGAAG
CCTCACTGGC GGACCTGCGC ACTCGCGCAG ACTCGCTACG GGGGTATCTT TGACTACGAC
GACAAAGCAC TGCGTCTAAT CGAAGTCAAC CGGGAACTCG AAGACCCCGA CGTCTGGAAC
GACTCGAAGC ACGCCCAGGC CCTCGGCCGG GAAAAGAAGC TGCTCGACGA CACGGTCGGC
AAACTCACGT CGCTCGATAA CGACCTGCGC GACGCGCAGG ACCTGTTCGA CATGGCTCGC
GAGGAAGACG ACGAGGAAAC GCTCCTCGCC TGCGAATCCG ACGCGCAAGG CATCGAACAG
CGTGTCGCCG ACATGGAATT CCGCCGCATG TTCGCGAACC CGGCCGATCC GAACAATGCG
TTTCTGGACA TCCAGGCCGG CGCCGGCGGC ACCGAGGCGT GCGACTGGGC GTCCATGCTG
CTGCGCCAGT ATCTGCGCTA CTGCGAGCGC AAAGGCTTCA AGACCGAAGT GCTGGAACAG
ACCGACGGCG ACGTCGCGGG CATCAAGAAC GCCACGATCA AGATCGAAGG CGAATACGCG
TACGGCTTTC TGCGCACCGA AACCGGCGTG CACCGCCTCG TGCGCAAGTC GCCGTTCGAT
TCGTCGGGCG GCCGTCATAC GTCGTTCTCG TCGGTGTTCG TGTACCCGGA AATCGACGAC
TCGATCGAAG TCGACATCAA CCCGGCCGAC CTGCGTATCG ACACGTACCG CGCGTCCGGC
GCGGGCGGTC AGCACATCAA CAAGACCGAC TCCGCGGTGC GTATCACGCA CATACCGTCG
GGCATCGTCG TGCAGTGCCA GAACGACCGG TCGCAGCACC GCAACCGTGC CGAGGCCATG
GCCATGCTGA AATCGCGCCT GTACGAAGCG GAAATCCGCA AGCGTCAGGA AGAGCAGGAC
AAGCTCGAAG CCGGCAAGAC CGATGTGGGC TGGGGTCATC AGATCCGCTC GTACGTGCTG
GATAACAGCC GTATCAAGGA TCTGCGGACC AACGTCGAAA TCAGCAATAC CAAGAGCGTG
CTCGATGGCG ACCTCGATCC GTTCATCAGC GCCAGCCTGA AACAGGGCGT CTAA
|
|---|
| Protein sequence | MPAVPTPVDL KPRKSPQNQP QTRAGSLNSH RRGVPIGYNF SFLRSYKRST WKRNVSTRSK
PHWRTCALAQ TRYGGIFDYD DKALRLIEVN RELEDPDVWN DSKHAQALGR EKKLLDDTVG
KLTSLDNDLR DAQDLFDMAR EEDDEETLLA CESDAQGIEQ RVADMEFRRM FANPADPNNA
FLDIQAGAGG TEACDWASML LRQYLRYCER KGFKTEVLEQ TDGDVAGIKN ATIKIEGEYA
YGFLRTETGV HRLVRKSPFD SSGGRHTSFS SVFVYPEIDD SIEVDINPAD LRIDTYRASG
AGGQHINKTD SAVRITHIPS GIVVQCQNDR SQHRNRAEAM AMLKSRLYEA EIRKRQEEQD
KLEAGKTDVG WGHQIRSYVL DNSRIKDLRT NVEISNTKSV LDGDLDPFIS ASLKQGV
|
|---|
| |