| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2541 |
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| Symbol | ispG |
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| ID | 6281461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2871628 |
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| End bp | 2872944 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642622100 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001896160 |
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| Protein GI | 187924518 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0147924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00169489 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGTTTTT CGATGCAATC CGAAGCTCAA TCCCAATCCA GTAGCAAGAT CGTTTCAACC
GAGCCGGTGT TCGGCGGCCA CGCACCGCGG CGCAAGTCGC ACGCGGTCGA CGTCCGTTGG
GGCGGCCAGC TCGTTACCAT CGGCGGCGAC GCACCCGTGC GCGTCCAGTC GATGACCAAC
ACGGACACCG CGGACGCCAT CGGCACCGCG ATCCAGATCA AGGAACTGGC GCAAGCCGGC
TCGGAACTGG TCCGTATTAC CGTGAACACG CCGGAAGCAG CCGCGGCGGT GCCGGCCGTG
CGCGAGCAGC TCGACCGCAT GGGCGTGTCG GTGCCGCTGG TCGGCGACTT CCATTACAAC
GGCCATTTGC TGTTGCGCGA TTACCCCGCG TGCGCGGAGT CGCTGTCCAA GTACCGGATC
AATCCGGGCA ACGTGGGCCA CGGCGCGAAA CGCGACACGC AATTCGCGCA GATGATCGAG
GCCGCGGCTA AGTACGACAA GCCGGTGCGT ATCGGCGTGA ACTGGGGCAG TCTCGATCAG
GACCTGCTCG CGAAGATGAT GGACGAGAAC GCCGCGCGTG CCACGCCGTG GGAAGCGCAA
AGCGTCATGT ACGAAGCGCT CATCCAGTCG GCGATCGGCT CGGCGGAGCG GGCGGTCGAA
CTCGGCCTGT CGCGCAATCA GATCATTCTG TCGTGCAAGG TCAGCGGCGT GCAGGATCTG
ATCGCCGTGT ACCGCGAACT CGCGCGCCGT TGTGACTTCG CGCTGCATCT CGGCTTGACC
GAGGCAGGCA TGGGTTCGAA GGGCATCGTG GCGTCGACCG CGGCGTTGTC CGTGTTGCTG
CAGCAGGGCA TCGGCGACAC GATCCGCATT TCGCTCACGC CGGAACCGGG CGCCTCGCGC
ACCGGCGAAG TGATCGTCGG CCAGGAAATC CTGCAGACCA TGGGTCTGCG CTCGTTCACG
CCGATGGTGA TCGCGTGCCC GGGTTGCGGC CGTACCACCA GCACGTTGTT CCAGGAACTC
GCATCGCAAA TCCAGACCTA TCTGCGCACG CAGATGCCGG TGTGGCGCGA TCAGTATCCT
GGCGTCGAGA AAATGCACGT CGCGGTGATG GGTTGCATCG TCAACGGTCC GGGCGAGTCG
AAGCAGGCGA ATATCGGCAT CAGCTTGCCG GGCTCGGGCG AGAACCCGGC CGCGCCGGTG
TTCATCGACG GCGAGAAGGT CAAGACGCTG CGCGGCGATA ACATCGCGCA AGAATTCCAG
CAAATCGTGA GTGACTACGT CGAGCGCAGC TATGGCCGCG CCACGGTAGC CAACTAA
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| Protein sequence | MGFSMQSEAQ SQSSSKIVST EPVFGGHAPR RKSHAVDVRW GGQLVTIGGD APVRVQSMTN
TDTADAIGTA IQIKELAQAG SELVRITVNT PEAAAAVPAV REQLDRMGVS VPLVGDFHYN
GHLLLRDYPA CAESLSKYRI NPGNVGHGAK RDTQFAQMIE AAAKYDKPVR IGVNWGSLDQ
DLLAKMMDEN AARATPWEAQ SVMYEALIQS AIGSAERAVE LGLSRNQIIL SCKVSGVQDL
IAVYRELARR CDFALHLGLT EAGMGSKGIV ASTAALSVLL QQGIGDTIRI SLTPEPGASR
TGEVIVGQEI LQTMGLRSFT PMVIACPGCG RTTSTLFQEL ASQIQTYLRT QMPVWRDQYP
GVEKMHVAVM GCIVNGPGES KQANIGISLP GSGENPAAPV FIDGEKVKTL RGDNIAQEFQ
QIVSDYVERS YGRATVAN
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