Gene Bphyt_2539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2539 
Symbol 
ID6281459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2869558 
End bp2870187 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content63% 
IMG OID642622098 
Producthypothetical protein 
Protein accessionYP_001896158 
Protein GI187924516 
COG category[S] Function unknown 
COG ID[COG2976] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0300828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00124926 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTTACC ACGACGAACA AGAATCGATT GAAAGTCTGA AGGCATGGTG GACGCAGTGG 
GGTAATGCAA CCACATGGAT CGTGCTGGTG GCACTGGTGG CCGCGGCCGG CTGGAACGGC
TGGAATTTCT GGCAACGGCG CCAGGCGGCG GAAGCCGCCG TGCTGTATGA CCAGGTCCAG
CAAGCCGTGG CGTCCGGCGA CAAGGCGAAG ATCACGCGCG TCGCCACCGA CATGGAAGAC
AAGTTCAGCC GCACCGCGTA TGCGCAAATG ACTGCGCTGG GCGCCGCCAA GGCGCTGTAC
GCCGCGGGCG ACGAAGCCGC CGCGAAGGCA CAACTGCAAT GGACCATCGA TCACGCGAAA
GATGACGAGT TCAAGCAGAT CGCCAAGCTG CGTCTCGCTT CGCTGCTGCT CGACGACAAG
GCTTACGACC AGGGCCTCGC GTTGCTAGCC GAACCGCAAT CCGACGCGTT CAAGGGCATC
GTGGCGAACG GCCGCGGCGA TCTGCTCGCC GCTCAAGGCA AGCGTGACGA TGCACGCGCG
GCCTACAAGC TCGCGCTCGA CTCGCTGTCG AAAAACGATA GCTCCGCACG CCAGTTGATT
CAGTTCAAGC TGGACGCGCT GGGCGGCTGA
 
Protein sequence
MSYHDEQESI ESLKAWWTQW GNATTWIVLV ALVAAAGWNG WNFWQRRQAA EAAVLYDQVQ 
QAVASGDKAK ITRVATDMED KFSRTAYAQM TALGAAKALY AAGDEAAAKA QLQWTIDHAK
DDEFKQIAKL RLASLLLDDK AYDQGLALLA EPQSDAFKGI VANGRGDLLA AQGKRDDARA
AYKLALDSLS KNDSSARQLI QFKLDALGG