Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2534 |
Symbol | |
ID | 6282007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2863448 |
End bp | 2864848 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642622093 |
Product | HflK protein |
Protein accession | YP_001896153 |
Protein GI | 187924511 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0683686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0000321559 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGAACGATT ACAACGAGCG GAGTATCTGG CTGCGCATGC GCACCATGCT GTCACTGAAC GATCCGGGCT GGGGCCGGGG AGACGGCAAT GGCGACCGGC AACGTCCCAA CGAGCCGAAG CGTCCGCCGA CCAAAGACGG CGAGGGCCCG CCTGATCTCG ACGAGATGTG GCGCGATTTC AACCGTCGTT TGAGCCGGGT GTTCGGCCGC AAGGGCGGCG GTGCGGGCGG CGGCCGTCCC GACAACGGTC GTAGCGCGCG CATCGGCGTG GGCATCGTGA TCGGCGTGCT GCTGGCCATT TATCTCGGCA GCGGCGTGTT CGTCGTGCAG GACGGCCAGG CCGGCGTGGT GATGCAGTTC GGCAAGTATC GCTACACGGC GGGACAGGGT GTGCACTGGC GTCTGCCGTA TCCGTTCGAA GCGCATGAGC TCGTCAATAT CGGCCAGATC CGCCAGGTGG AAGTCGGCCG CAACAACGTG GTGCGTCTCG CGAATGTGAA AGACGCGTCG ATGCTCACGC ACGACGCGGA CATCGTCGAT GTGCGCTTCG CCGTGCAATA TCAGGTGAAG AAGCCGACCG ACTATCTGTT TCGCAGCGTC GATCCCGATC AGGGCGTGAT GCAGGCGGCC CAGGCGGCGG TGCGCAGCAT CGTCGGCGCG CGCAGCACCA ATGACATCCT CTATCAGGAT CGCGAAACAA TTCGCCAGCA ACTCATGGCG GCGATCCAGC AATCTCTGGA TGAATATCAG TCCGGCCTCG CCGTGACCGG TGTGACGATC CAAGGCGTGC AGGTGCCCGA CCGCGTGCAG GCCGCATTCG ACGACGCCGC CAAAGTCCGT CAGGAAAACG ACCGCGCCAA GCGCGATGCC GAAGCCTACG CCGCGGATCT TTTGCCGCGC GCGCAAGCCG ACGTGGCACG CCAGATCGAC GAAGCGAAAA CCTACAGCGA CAAGACTGTG GCTCAGGCAC AAGGCGACGC CGAGCGCTTC AAGCAGGTCT ACGCGCAGTA CTCGAAAGCG CCCGCCGTGG TTCGCGAGCG CCTGTACCTG GACACCATGC AGCAGATCTA TTCGAATACG ACCAAGGTGT ATGTGGACAG CAAGAGCGGC AACAACGTGC TGTATCTGCC GCTCGACAAG CTCGTCGAGC AGACTCGCCA GCGGGTCGCC GACGCTGCCG CCGCCTCGGG CACGGCTGCA GGCGCCACGG CCGCTGCCGC GCCGCAAGCG GCGAGCAATG CCGCGTCGCC TTTGTCCGCA CCGTCTGCCT CCGCAACCGG CGCGGCGGCC TCGGCGCCTG CCGCCTCCGC CGCGCCGGCC AGCCAGGCCG CATCCGGCAG CGACCCGCTG CGTTCACGCG ACTCCTTCCG CAGCCGTATG CGCGAAGACG ACGTTCAATA A
|
Protein sequence | MNDYNERSIW LRMRTMLSLN DPGWGRGDGN GDRQRPNEPK RPPTKDGEGP PDLDEMWRDF NRRLSRVFGR KGGGAGGGRP DNGRSARIGV GIVIGVLLAI YLGSGVFVVQ DGQAGVVMQF GKYRYTAGQG VHWRLPYPFE AHELVNIGQI RQVEVGRNNV VRLANVKDAS MLTHDADIVD VRFAVQYQVK KPTDYLFRSV DPDQGVMQAA QAAVRSIVGA RSTNDILYQD RETIRQQLMA AIQQSLDEYQ SGLAVTGVTI QGVQVPDRVQ AAFDDAAKVR QENDRAKRDA EAYAADLLPR AQADVARQID EAKTYSDKTV AQAQGDAERF KQVYAQYSKA PAVVRERLYL DTMQQIYSNT TKVYVDSKSG NNVLYLPLDK LVEQTRQRVA DAAAASGTAA GATAAAAPQA ASNAASPLSA PSASATGAAA SAPAASAAPA SQAASGSDPL RSRDSFRSRM REDDVQ
|
| |