Gene Bphyt_2534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2534 
Symbol 
ID6282007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2863448 
End bp2864848 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content66% 
IMG OID642622093 
ProductHflK protein 
Protein accessionYP_001896153 
Protein GI187924511 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01933] HflK protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0683686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0000321559 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAACGATT ACAACGAGCG GAGTATCTGG CTGCGCATGC GCACCATGCT GTCACTGAAC 
GATCCGGGCT GGGGCCGGGG AGACGGCAAT GGCGACCGGC AACGTCCCAA CGAGCCGAAG
CGTCCGCCGA CCAAAGACGG CGAGGGCCCG CCTGATCTCG ACGAGATGTG GCGCGATTTC
AACCGTCGTT TGAGCCGGGT GTTCGGCCGC AAGGGCGGCG GTGCGGGCGG CGGCCGTCCC
GACAACGGTC GTAGCGCGCG CATCGGCGTG GGCATCGTGA TCGGCGTGCT GCTGGCCATT
TATCTCGGCA GCGGCGTGTT CGTCGTGCAG GACGGCCAGG CCGGCGTGGT GATGCAGTTC
GGCAAGTATC GCTACACGGC GGGACAGGGT GTGCACTGGC GTCTGCCGTA TCCGTTCGAA
GCGCATGAGC TCGTCAATAT CGGCCAGATC CGCCAGGTGG AAGTCGGCCG CAACAACGTG
GTGCGTCTCG CGAATGTGAA AGACGCGTCG ATGCTCACGC ACGACGCGGA CATCGTCGAT
GTGCGCTTCG CCGTGCAATA TCAGGTGAAG AAGCCGACCG ACTATCTGTT TCGCAGCGTC
GATCCCGATC AGGGCGTGAT GCAGGCGGCC CAGGCGGCGG TGCGCAGCAT CGTCGGCGCG
CGCAGCACCA ATGACATCCT CTATCAGGAT CGCGAAACAA TTCGCCAGCA ACTCATGGCG
GCGATCCAGC AATCTCTGGA TGAATATCAG TCCGGCCTCG CCGTGACCGG TGTGACGATC
CAAGGCGTGC AGGTGCCCGA CCGCGTGCAG GCCGCATTCG ACGACGCCGC CAAAGTCCGT
CAGGAAAACG ACCGCGCCAA GCGCGATGCC GAAGCCTACG CCGCGGATCT TTTGCCGCGC
GCGCAAGCCG ACGTGGCACG CCAGATCGAC GAAGCGAAAA CCTACAGCGA CAAGACTGTG
GCTCAGGCAC AAGGCGACGC CGAGCGCTTC AAGCAGGTCT ACGCGCAGTA CTCGAAAGCG
CCCGCCGTGG TTCGCGAGCG CCTGTACCTG GACACCATGC AGCAGATCTA TTCGAATACG
ACCAAGGTGT ATGTGGACAG CAAGAGCGGC AACAACGTGC TGTATCTGCC GCTCGACAAG
CTCGTCGAGC AGACTCGCCA GCGGGTCGCC GACGCTGCCG CCGCCTCGGG CACGGCTGCA
GGCGCCACGG CCGCTGCCGC GCCGCAAGCG GCGAGCAATG CCGCGTCGCC TTTGTCCGCA
CCGTCTGCCT CCGCAACCGG CGCGGCGGCC TCGGCGCCTG CCGCCTCCGC CGCGCCGGCC
AGCCAGGCCG CATCCGGCAG CGACCCGCTG CGTTCACGCG ACTCCTTCCG CAGCCGTATG
CGCGAAGACG ACGTTCAATA A
 
Protein sequence
MNDYNERSIW LRMRTMLSLN DPGWGRGDGN GDRQRPNEPK RPPTKDGEGP PDLDEMWRDF 
NRRLSRVFGR KGGGAGGGRP DNGRSARIGV GIVIGVLLAI YLGSGVFVVQ DGQAGVVMQF
GKYRYTAGQG VHWRLPYPFE AHELVNIGQI RQVEVGRNNV VRLANVKDAS MLTHDADIVD
VRFAVQYQVK KPTDYLFRSV DPDQGVMQAA QAAVRSIVGA RSTNDILYQD RETIRQQLMA
AIQQSLDEYQ SGLAVTGVTI QGVQVPDRVQ AAFDDAAKVR QENDRAKRDA EAYAADLLPR
AQADVARQID EAKTYSDKTV AQAQGDAERF KQVYAQYSKA PAVVRERLYL DTMQQIYSNT
TKVYVDSKSG NNVLYLPLDK LVEQTRQRVA DAAAASGTAA GATAAAAPQA ASNAASPLSA
PSASATGAAA SAPAASAAPA SQAASGSDPL RSRDSFRSRM REDDVQ