Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2528 |
Symbol | |
ID | 6282865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2856541 |
End bp | 2858427 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642622087 |
Product | K potassium transporter |
Protein accession | YP_001896147 |
Protein GI | 187924505 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3158] K+ transporter |
TIGRFAM ID | [TIGR00794] potassium uptake protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00494923 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000000660434 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACAGATA ACAATCACGT GCACAAACAG CCTCTGCCTT CCCTCGCTCT CGCTGCGATC GGTGTGGTGT TCGGCGATAT CGGCACGAGC CCGTTGTACT CGCTGAAAGA AGCCTTCAGC CCCTCTCACG GCATTCCGCT GACCGATCAA TCAATCCTCG GTGTGATCTC GCTGCTGTTC TGGGCGATCG TGATCGTGGT CGGCATCAAG TACGTGTTGT TCGTCATGCG TGCGGACAAC AACGGCGAGG GCGGTGTGCT CGCGCTGATG GCGCTGGCGC TGCGCTCGCT CGACGAGAAG TCGAAAATGG CCGGCGTGCT GGTGATGCTC GGCATTTTCG GCGCCTGCAT GTTCTATGGC GACGCGGTGA TCACGCCGGC CATCTCGGTG ATCTCGGCAG TCGAGGGTCT GGAAATCGCC GCACCGCATC TCTCGCATCT GGTGCTGCCG CTCACCATGG TGATCCTCGT GCTGCTGTTC TGGATTCAGC GGCACGGCAC GGCGATGGTC GGCCGTCTGT TCGGTCCGAT CATGGTGGTG TGGTTCGCCG TGCTCGCGGT GCTCGGCCTG TGGCATATCC TGCAGTCGCC GAACGTGATC CGCGCACTGA ACCCGTATTA CGCGTACACC TTCATGGCCG CGCACGTGCT GCAGGCCTAC GTGGTGCTCG GCTCGGTCGT GCTGGTGCTG ACCGGCGCCG AAGCGCTATA TGCCGACATG GGCCACTTCG GCGCCAAGCC GATCCGTATG GCGTGGTATT TCCTCGTGAT GCCTTCGCTG GTGCTGAACT ACTTCGGCCA GGGCGCGCTG CTGATGCACG ATCCGAAGGC CATCGAAAAT CCGTTCTTCC TGCTTGCGCC GGACTGGGCC TTGCTGCCGC TCGTCGTGCT CTCGACCGTG GCGACCGTGA TCGCCTCGCA GGCCGTGATT TCTGGCGCTT ATTCGCTCAC GAGCCAGGCG ATCCAGCTCG GCTACGTGCC GCGCATGAAG ATCCTGCACA CGTCGGAACT GGCGATCGGC CAGATCTATG TGCCGGTGGT GAACTGGATG CTGCTGTTCA TCATTCTGTG CATCGTGATT GCCTTCAAGA GCTCGGACAA TCTTGCGGCC GCGTACGGTA TCGCGGTGAC GGCCACCATG GTGATCACCA CAATTCTCGC CTGCGTCGTG ATGGTGAACG TGTGGAACTG GAACAAGCTG CTGGTGGCGC TGATCATCGG CGTGTTCATG ACCGTCGATT TAGGATTTTT CGGCGCGAAC CTGCTGAAGG TGGAAGAAGG CGGGTGGTTG CCGCTCGGCA TCGGCGCGTT GCTGTTCTTC CTGCTGATGA CCTGGTTCAA GGGCCGTATG ATCGTCAAGG AACGCACGGC CGCGGACGGT ATTCCTCTCA TGCCGTTCCT GCAGGGCTTG CTCGCGCATC CGCCGCATCG CGTGTCGGGC ACGGCGATCT ATCTGACCGG CAGCGATTCG CTCGTGCCGG TGAGTCTGCT GCACAATCTG AAGCACAACA AGGTGCTGCA TGAGCGCACC ATCTTCCTGA CCTTCGTGAC GCGCGATATT CCGTACGTGA ACGACTCGGA GCGTGTGACG GTCAAGGATA TCGACGGCGG CCTGTATCTC GTCAAGGCGG CCTACGGCTT CAACGAAACG CCGGACGTGA AGGCGGTGCT GCTCGAAGTC GGACGTACGC GTGACATGAC CTTCGAGATG ATGGACACGT CGTTTTTCCT CGCGCGCGAA ACGGTGGTGC CCACGCAACT GCCCGGCATG TCGGTGTGGC GCGAACGTGT GTTCGCATGG ATGCATCAGA ATGCCGCCAA GCCGACGGAC TTCTTTAGTA TTCCGGCTAA TCGGGTGGTG GAGTTGGGGA CCAAGATCGA GATCTGA
|
Protein sequence | MTDNNHVHKQ PLPSLALAAI GVVFGDIGTS PLYSLKEAFS PSHGIPLTDQ SILGVISLLF WAIVIVVGIK YVLFVMRADN NGEGGVLALM ALALRSLDEK SKMAGVLVML GIFGACMFYG DAVITPAISV ISAVEGLEIA APHLSHLVLP LTMVILVLLF WIQRHGTAMV GRLFGPIMVV WFAVLAVLGL WHILQSPNVI RALNPYYAYT FMAAHVLQAY VVLGSVVLVL TGAEALYADM GHFGAKPIRM AWYFLVMPSL VLNYFGQGAL LMHDPKAIEN PFFLLAPDWA LLPLVVLSTV ATVIASQAVI SGAYSLTSQA IQLGYVPRMK ILHTSELAIG QIYVPVVNWM LLFIILCIVI AFKSSDNLAA AYGIAVTATM VITTILACVV MVNVWNWNKL LVALIIGVFM TVDLGFFGAN LLKVEEGGWL PLGIGALLFF LLMTWFKGRM IVKERTAADG IPLMPFLQGL LAHPPHRVSG TAIYLTGSDS LVPVSLLHNL KHNKVLHERT IFLTFVTRDI PYVNDSERVT VKDIDGGLYL VKAAYGFNET PDVKAVLLEV GRTRDMTFEM MDTSFFLARE TVVPTQLPGM SVWRERVFAW MHQNAAKPTD FFSIPANRVV ELGTKIEI
|
| |