| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2524 |
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| Symbol | |
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| ID | 6282861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2850040 |
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| End bp | 2852307 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642622083 |
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| Product | helicase c2 |
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| Protein accession | YP_001896143 |
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| Protein GI | 187924501 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00188741 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000000263353 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGAATTCAC CGCTTGAAAC TTCATCCCGT GCCACGCCGG GCGACGCATC TGGAGCCGTC
GCACCGGCGC CGCGTCCTGC CGCGTCCGCA CTGAGCGCGT CGCTGAATCC ACGCCGCGTC
GCCGAACTGG ACGAGATTTT CGCCGCCAAT GGTTTGCTGG CCCGTCAGAT CGACGGCTAC
CGCTCGCGCG CGTCGCAGAT CGAAATGTCG CGCGCCGTGG CTGCCGCCAT GGAGGCGTCG
GGTCGCGCAA TGCCCGAGCC CGCCATGTTC GAGGCGCAGA AGCGTCCGGC GCGGCGTCTG
CAGGGCGCAG CCGATACCGC CGCCGAGGCC GCTGAGGGCG TCGAAGCGGG CGGCCTCGAC
GGCAGCGAAA ACACGCTGAT CGTCGAAGCT GGTACCGGCA CCGGCAAGAC CTACGCGTAC
CTGGTGCCGG CCATGCTGTG GGGCGGCAAA GTGATCGTCT CGACCGGCAC GAAACATTTG
CAGGATCAGC TCTTTCAGCG CGACATTCCG ACCGTGCGCG ATGCGCTCGC GGTGCCGGTC
TCGGTCGCTA TGCTCAAGGG CCGTGCGAAT TACCTGTGCC ACTACTATCT GCAGCGCACT
GCGGATAACG GCCGTCTGCC GTCGCGCCAG GAAACCTCGT ACCTGCAGGA TATCGTGCGC
TTCGCCAAGA TCACGCGCAC CGGCGACAAG GCCGAACTGG CGAGCGTGCC GGAAACGGCC
GCGGTGTGGT CGATGGTCAC GTCCACGCGC GAAAACTGTC TCGGCCAGGA ATGTCCGCAT
TACAAGGACT GCTTTGTAAT GCAGGCGCGC CGCGAGGCGC AGCAGGCGGA TATCGTGGTG
GTGAATCACC ATCTGTTTTT CGCCGACATC ATGTTGCGCG ATACGGGCAT GGCCGAGTTG
CTGCCCACCG CCAACACCGT GATTTTCGAC GAAGCGCATC AATTGCCCGA GACAGCTACG
CTGTTTTTCG GCGAAACGCT CTCGACTACG CAGTTTCTCG AGCTCGCGCG CGATTCGGTC
GCCGAAGGTT TGGGCCATGC GCGTGAAACG GTCGATTGGG TCAAGCTCGG CGCCACGCTC
GAGCGCGCGG CGCGCGATGT GCGGCTCGCC TTCAAGGAAG ATTCGGTGCG TTTGTCGATC
GGCCAGTTGG CTGACGATCA TCCGCTGTTC CCCGCGCTCG AAACCCTCGA AACCGAACTC
GATGCATTGG CGTCCGCGTT GGCCGGTCAA GCTGAGCGCG CCGAATCGAT CGGTGCGTGT
CTGCGCCGCG CACGCGAGCT GCAAGGCGTG CTGGCCGGCT GGACCACGCC ACCCACGCCG
ACCGAGCGCG AAGCCGCTGA CGTCGCCTCT ACTGACGGCA AAACAGAGCG CGCCGATCCG
AACGAAAAGG TGCGCTGGAT CGAAGTCTTC TCGCATACGG TGCAGCTGCA CGAAACGCCG
TTGTCGGTCG CGCCGATCTT CGCGAAACAG CGCGCCGGTG TGCCGCGCGC GTGGATCTTT
ACGTCGGCCA CGCTGTCGGT GCGCGGCGAT TTCACGCACT ATGCCGCGCA GATGGGCCTG
AACGCGAAGC GCTCGATGAC GCTGCCCAGT CCCTTCGACT ATCCGACGCA GGGGCTGCTC
TACGTGCCGC GCAATTTGCC GCAGCCATCT TCGCCGATGT TCACCGACGC CGTATTCGAC
GCCGCATTGC CTGCGATCGA AGCATCGGGC GGCGGCGTCT TCATGCTGTG CACGACGCTG
CGCGCGGTGG ACCGCATCTC GGCCAAGCTG CGCGACACGA TCGAAGCGCG CGGCTGGGAC
TATCCACTGC TCGTGCAGGG CGATGCGAGC CGCACCGAAT TGCTGGATCG CTTCCGCTCA
TATGGCAACG CAATCCTGGT GGGCAGCCAG AGCTTCTGGG AAGGCGTGGA CGTGCGCGGC
GACGCTTTGT CGCTGGTGGT GATCGACAAG CTGCCGTTCG CGCCGCCCGA CGATCCGGTT
TTGTCAGCTC GACTCGAAGC GCTCACCAAG AAGGGCTTGA GCCCATTCGC CGTGCATCAG
TTGCCGCAGG CCGTCATCAC CCTGAAGCAG GGCGCAGGCC GTCTGATCCG CGCTGAGACC
GATCGTGGCG TGCTGATGAT CTGCGACACA CGACTCGTCG ACAAACCGTA TGGGCGCCGT
ATCTGGCAGA GCCTGCCGCC TTTCAAACGC ACGCGTGAGA TCGAGGTGGT GCGGGAGTTT
TTTGAAGAGA GCGCCACGCC GGCGCAAGAG GCTGATCGGG CTGATTAA
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| Protein sequence | MNSPLETSSR ATPGDASGAV APAPRPAASA LSASLNPRRV AELDEIFAAN GLLARQIDGY
RSRASQIEMS RAVAAAMEAS GRAMPEPAMF EAQKRPARRL QGAADTAAEA AEGVEAGGLD
GSENTLIVEA GTGTGKTYAY LVPAMLWGGK VIVSTGTKHL QDQLFQRDIP TVRDALAVPV
SVAMLKGRAN YLCHYYLQRT ADNGRLPSRQ ETSYLQDIVR FAKITRTGDK AELASVPETA
AVWSMVTSTR ENCLGQECPH YKDCFVMQAR REAQQADIVV VNHHLFFADI MLRDTGMAEL
LPTANTVIFD EAHQLPETAT LFFGETLSTT QFLELARDSV AEGLGHARET VDWVKLGATL
ERAARDVRLA FKEDSVRLSI GQLADDHPLF PALETLETEL DALASALAGQ AERAESIGAC
LRRARELQGV LAGWTTPPTP TEREAADVAS TDGKTERADP NEKVRWIEVF SHTVQLHETP
LSVAPIFAKQ RAGVPRAWIF TSATLSVRGD FTHYAAQMGL NAKRSMTLPS PFDYPTQGLL
YVPRNLPQPS SPMFTDAVFD AALPAIEASG GGVFMLCTTL RAVDRISAKL RDTIEARGWD
YPLLVQGDAS RTELLDRFRS YGNAILVGSQ SFWEGVDVRG DALSLVVIDK LPFAPPDDPV
LSARLEALTK KGLSPFAVHQ LPQAVITLKQ GAGRLIRAET DRGVLMICDT RLVDKPYGRR
IWQSLPPFKR TREIEVVREF FEESATPAQE ADRAD
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