| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2517 |
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| Symbol | |
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| ID | 6282029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2839860 |
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| End bp | 2840921 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642622076 |
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| Product | RNA methyltransferase, TrmH family, group 1 |
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| Protein accession | YP_001896136 |
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| Protein GI | 187924494 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.127237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00000580733 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGTGCC GGACGGCAAA GCAGGACGCG AATTTCGTTA TTTTACCTGA GTCCGGACGC
CGCGGCAGCG TTTGCGGGGC CCGCGGCCAG CCTGCCGAAG TTTTACGCGG CTCGGCCCGG
CACTCGCAGG CGCATTGCCG TACGCATCGG CATGCGCATC TGCGCCGATT TCGGACCGCC
CGCGGCGTTG GCGCTACCAT ACGCGTCTTT AGCTTGCAGA ATTCCATCGT GGACCACACC
CACCATTCCT CCGATCCTGC CGTAGCCGAA CTGCGCGGCG GCTTCACCTC GACGCGCTTC
GTGCTGGTCG AGCCGAGCCA TCCGGGCAAC GTCGGCGCCG CGGCGCGCGC GCTGAAAACC
ATGGGTTTCT CGCGGCTCGT CCTGGTGTCG CCGCGCGTGC CGCACGTGCA AAGCGACCCG
GAAGCCATCG CCATGGCAAG CGGTGCCGAC GACGTGCTGG CGTCCGCGCA CGTCGTGCCG
ACCCTCGCCG ATGCCTTGAG CGGCGTGCAC TGGTCGATCG CGCTGACCGC GCGGTTGCGC
GAATACGGGC CGCCGCAATG GACGCCGCGT GCCGCGGCCG GCATTGCGCG TGAACAGGCG
TTGCATGGCG AGATCGCACT GGTGTTCGGC AATGAGCGCA CGGGTTTGTC GAACGAGGAC
GTCGAGCGAT GCAGCGCGCT CGCGCATATT CCCGCCAATC CGGCCTATAG CTCGCTCAAT
CTCGCGCAGG CCGTACAGGT GCTGGCGTAT GAACTGCGCA CGATGTATCT GTCGGCCGGG
AGCGGCGCCG CTGCGGCGCA AACCGCGCCT CAGGCGGCAG CGGGCGAGGG CGAAGCCGTC
GGTGCGCGCG CCGCGAGCGA CGAAATCGAA AGCATGTTCA CGCATCTGGA AAGCGCGCTC
GTCGCGCTCG AATTTCTCGA TCCGGCGAAT CCGAAGAAGC TGATGTCGCG CCTGCGGCGT
CTCTTTGCGC GCTCGGGTCT CGAGCGCGAG GAAGTGAATA TCGTGCGCGG CATCGCCAAG
CACATTCTGT TGAAGAGCAA GTCCAAAGAC GACGCGTCCT GA
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| Protein sequence | MQCRTAKQDA NFVILPESGR RGSVCGARGQ PAEVLRGSAR HSQAHCRTHR HAHLRRFRTA
RGVGATIRVF SLQNSIVDHT HHSSDPAVAE LRGGFTSTRF VLVEPSHPGN VGAAARALKT
MGFSRLVLVS PRVPHVQSDP EAIAMASGAD DVLASAHVVP TLADALSGVH WSIALTARLR
EYGPPQWTPR AAAGIAREQA LHGEIALVFG NERTGLSNED VERCSALAHI PANPAYSSLN
LAQAVQVLAY ELRTMYLSAG SGAAAAQTAP QAAAGEGEAV GARAASDEIE SMFTHLESAL
VALEFLDPAN PKKLMSRLRR LFARSGLERE EVNIVRGIAK HILLKSKSKD DAS
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