| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2490 |
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| Symbol | |
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| ID | 6284410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2810278 |
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| End bp | 2811888 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642622044 |
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| Product | malate synthase |
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| Protein accession | YP_001896110 |
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| Protein GI | 187924468 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0199429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00255975 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAAGCC CGCAGTCCTC GCATTCATCG TTGCAGTTGC CGCAGGGCAT GGAAATCACG
GCTGAAATCA AGCCGGGCTA TGACGCGATT CTCTCGCGCG AAGCGCTCGA ACTCGTCGCC
GCGCTGCATC GCACGTTCGA GCCGCGCCGC CAGCAGTTGT TGCAGGCGCG CGCGGAACGC
ACAAAGCGCC TCGATGCCGG CGAGCGTCCG GACTTCCTCG CCGAAACAAA AAGCGTGCGT
GACGGCGACT GGACAATCGC GCCGCTGCCG CAGGACCTGC AATGCCGACG CGTGGAAATC
ACCGGTCCGG TCGAGCGCAA GATGATCATC AACGCGCTGA ATTCGGGCGC GGATTCCTAC
ATGACCGACT TCGAAGATTC GAATGCGCCG AGCTGGGATA ATCAGATCAC CGGCCATATC
AATCTGAAGG ACGCGGTGCG CCGCACGATT TCGCTGGAAC AGAACGGCAA GTCGTACACG
CTGAACGACA AGGTCGCCAC GCTGATCGTG CGCCCGCGCG GCTGGCATCT GGACGAGAAG
CACGTGAAGG TGGACGGCAA GCGCGTGTCG GGCGGCATCT TCGATTTCGC GCTCTTCATG
GTGCACAACG CGAAGGAGCT GGTCGCGCGC GGCTCGGGCC CGTACTTCTA TCTGCCGAAG
ATGGAAAGCC ATCTCGAAGC ACGTCTTTGG AACGACATTT TCGTGGCCGC GCAGGAAGCC
GTCGGTGTGC CGCGCGGCAC GATTCGCGCA ACGGTGCTGA TCGAGACAAT CGTCGCCGCT
TTCGAAATGG ATGAGATCCT CTACGAGCTG CGCGAACATA GCTCGGGCCT GAATGCCGGC
CGCTGGGACT ACATCTTTTC GGCGATCAAG AAGTTCAAGG CCGACCGCGA CTTCTGTCTC
GCCGACCGCT CGCAGATCAC GATGACCTCG CCGTTCATGC GCGCCTACGC GCTGCTGTTG
CTGAAGACTT GCCATCGCCG CAATGCGCCG GCGATCGGCG GCATGAGCGC GCTGATTCCG
ATCAAGAACG ATCCGGCGGC GAACGACAAG GCGATGAGCG GCGTGCGCTC GGACAAGGCG
CGCGATGCCG GCGACGGCTA CGACGGCGGC TGGGTCGCGC ATCCGGGTCT CGTGCCGATC
GCAATGGAAG AGTTCGTCAA GGTGCTCGGC GACAAGCCGA ACCAGATCGG CAAGCAACGC
GACGACGTAC TCGTCACGGC CACCGACCTG ACGGACTTCC GTCCGGAAGC GCCGATCACC
GAAGGCGGTC TGCGCAACAA CATCAACGTC GGCATTCACT ACCTGGGCGC GTGGCTCGCA
GGCAATGGCT GTGTGCCGAT TCACAATCTG ATGGAAGACG CCGCCACCGC GGAAATCTCG
CGCTCGCAGG TGTGGCAGTG GATCCGCTCG CCGAAGGGCA AGCTCGAAGA CGGCCGCAAG
GTGACGGCGG AACTGGTGCG CGAGTTATCG GCGCAGGAGC TCGAGAAGGT GAAGCAGGCC
GTGGGCGGCG ATACCAAGCC GTATGAGCGC GCCGCGCAGA TCTTCGAAGA GATGTCGACA
TCGGAGCAGT TCACCGACTT CCTCACGCTG CCGCTGTACG AAGAAATTTG A
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| Protein sequence | MASPQSSHSS LQLPQGMEIT AEIKPGYDAI LSREALELVA ALHRTFEPRR QQLLQARAER
TKRLDAGERP DFLAETKSVR DGDWTIAPLP QDLQCRRVEI TGPVERKMII NALNSGADSY
MTDFEDSNAP SWDNQITGHI NLKDAVRRTI SLEQNGKSYT LNDKVATLIV RPRGWHLDEK
HVKVDGKRVS GGIFDFALFM VHNAKELVAR GSGPYFYLPK MESHLEARLW NDIFVAAQEA
VGVPRGTIRA TVLIETIVAA FEMDEILYEL REHSSGLNAG RWDYIFSAIK KFKADRDFCL
ADRSQITMTS PFMRAYALLL LKTCHRRNAP AIGGMSALIP IKNDPAANDK AMSGVRSDKA
RDAGDGYDGG WVAHPGLVPI AMEEFVKVLG DKPNQIGKQR DDVLVTATDL TDFRPEAPIT
EGGLRNNINV GIHYLGAWLA GNGCVPIHNL MEDAATAEIS RSQVWQWIRS PKGKLEDGRK
VTAELVRELS AQELEKVKQA VGGDTKPYER AAQIFEEMST SEQFTDFLTL PLYEEI
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