| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2485 |
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| Symbol | |
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| ID | 6284291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2804067 |
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| End bp | 2805695 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642622039 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_001896105 |
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| Protein GI | 187924463 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.375937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000530427 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTTCGA GCAATACCCC CAGCAGCCCG TTGAACGCCA TCGCCGATCA AGCCCTCGGT
CTCGCCGACG CACCCGTACA AGCCGCAGCC GTTGCTGCCG CTCCGGAAGC CGTCGCCGCG
GAAGCCGCAG CGCCCACCGG CCCGTCGTTC GCGTCGCTCG GTCTCTCCGC GGATGTCGTC
TCCGCGCTGA CCGCCGCTGG CTATCAAAAC CCGACTCCGG TTCAGCAACG CGCAATCCCG
GCTGGCATCG CCGGCCGCGA TCTGATGGTC TCGAGCCCGA CCGGTTCGGG CAAGACCGCC
GCGTTCATGC TGCCCGCCAT CGAGCGTTTC TCGCAGCTGC AAAAAGCACA AGCCAGCCAG
CCGCGTGAAC CGCGTCCGGC TGACGGTGCC CGCACGCGTC GTCCGCAACC GGTTGCCCGT
CCGACCATGC TGGTTCTGAC GCCGACCCGC GAACTCGCCA TGCAGGTCAC TACCGCCGCT
GCCACGTACG GCAAGCACCT CAAGCGTCTG CGCACCGTCA GCATTCTGGG CGGCGTCGCT
TATGGTCAAC AGCTGATGCT GCTGGCCAAG AACCCGGAAA TCCTGGTCGC CACGCCGGGC
CGTTTGATCG ACCACCTGGA ACGCGGCCGC ATCGATCTGT CGCAACTGCA GATCCTCGTG
CTCGACGAAG CCGACCGCAT GCTCGACATG GGCTTCATCG AAGACATCGA GACGATCGTC
GCCGCTACGC CGGCTACGCG TCAAACCATG CTGTTCTCGG CCACGCTCGA CGGCAAGATC
ACCTCGCTGA CGGGCCGCCT GCTGAAGGAT CCGGAACGCA TCGAGATCGT TCAGCGTCTG
GAACAGCGCA CCAACATCGC GCAAACCGTC CATTACGTGG ATGACCGCGA TCACAAGGAT
CGTCTGCTCG ACCATCTGCT GCGCGACGAA GGCCTCGACC AGGCGATCGT CTTCACGGCA
ACCAAGATGG ACGCGGACCA ACTGGCAGGC CGTCTGGCCG ACGCCGGTTT CGAATCGGCC
GCCCTGCACG GCGATCTGCC GCAAGGCGCG CGTAACCGCA CGATCCGTGC GCTGCGCGAG
CGCCGTGTGC GCGTGCTGGT GGCAACGGAC GTCGCCGCTC GCGGTATCGA CATTCCGGGC
ATCACGCACG TGTTCAACTA CGACCTGCCG AAGTTCGCCG AAGATTACGT GCACCGCATC
GGCCGTACCG GCCGTGCTGG CCGCTCGGGT ATCGCGGTGA GCCTCGTGCA TCACGCCGAG
CAAGGCGCGT TGAAGCGCAT CGAGCGTTTC GTGCGTACTC CGCTGCCGGT CAATGTCGTC
GAAGGCTTCG AGCCGCGCAA GTCGGCTCCG TCGGGTAACG GCCGTCCTGG CTTTGGCGGC
CGCGGCCGTC CGGGCGGCGG CAACGGCGGT GGCCGTCGCT TTGGCAGCGG TTCGGGCAAG
CCGGCTGGTA GCGGCGGTGC GCGCAGCGGC AGCGGCAATG GCAGCAGCTG GGCCGGCAAG
TCGGCTGGCG GCGGTTCGCG TGACGGCGGC TTCGGCGGCG GTTCGCGCGA AGGCTACGGC
GGCTCGCGCG ACGGCGGCTA CGGCGCACGC CGCAGCGACG GCCCGCGTAC GGCGCGTCGC
GGCAGCTAA
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| Protein sequence | MTSSNTPSSP LNAIADQALG LADAPVQAAA VAAAPEAVAA EAAAPTGPSF ASLGLSADVV
SALTAAGYQN PTPVQQRAIP AGIAGRDLMV SSPTGSGKTA AFMLPAIERF SQLQKAQASQ
PREPRPADGA RTRRPQPVAR PTMLVLTPTR ELAMQVTTAA ATYGKHLKRL RTVSILGGVA
YGQQLMLLAK NPEILVATPG RLIDHLERGR IDLSQLQILV LDEADRMLDM GFIEDIETIV
AATPATRQTM LFSATLDGKI TSLTGRLLKD PERIEIVQRL EQRTNIAQTV HYVDDRDHKD
RLLDHLLRDE GLDQAIVFTA TKMDADQLAG RLADAGFESA ALHGDLPQGA RNRTIRALRE
RRVRVLVATD VAARGIDIPG ITHVFNYDLP KFAEDYVHRI GRTGRAGRSG IAVSLVHHAE
QGALKRIERF VRTPLPVNVV EGFEPRKSAP SGNGRPGFGG RGRPGGGNGG GRRFGSGSGK
PAGSGGARSG SGNGSSWAGK SAGGGSRDGG FGGGSREGYG GSRDGGYGAR RSDGPRTARR
GS
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