Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2476 |
Symbol | |
ID | 6284538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2793968 |
End bp | 2795344 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642622030 |
Product | DNA repair protein RadA |
Protein accession | YP_001896096 |
Protein GI | 187924454 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0409258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0000251063 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCAAAAC CCAAAACGTT GTACATCTGC AGTGAATGCG GCGGGCAATC GCCGAAATGG GCCGGCCAGT GCCCCTCGTG CAATGCGTGG AACACGCTGG TCGAGTCGGT GGCGGAAGCG CCGTCCACGC ACCGTTTCCA GGCGCTCGCG AAGAGCGCGC CGGTGCGCCG TCTCGCCGAT ATCGAGGCAT CCGATGTGCC GCGCTTTTCC ACCGGGGTGA GCGAGTTCGA CCGCGTGCTC GGCGGCGGTC TCGTGCCGGG CGGCGTGGTG CTGATCGGCG GCGATCCGGG CATCGGCAAA TCGACGCTGC TGCTGCAATC GCTCGCGGAA ATCGCTGCCG ACAAACGCGC GCTTTATATC AGCGGCGAAG AGTCGGCTGC GCAAATTGCG TTGCGCGCGC AACGGCTTTC GTTGCTGGAG CCGGGTTCGA AGGCAAGCGA GCTGCAATTG CTGGCGGAAA TCCAGCTCGA AAAAATCCAG GCGACGATCT CCGAGCAGCG GCCCGATGTC GCGGTGATCG ACTCGATCCA AACGGTCTAT TCCGACGCGC TGACTTCAGC GCCGGGTTCG GTCGCCCAGG TGCGCGAATG CGCGGCGCAA CTCACGCGCA TTGCCAAGCA GTCGGGCACC ACCATCATCA TGGTCGGCCA CGTGACCAAG GAAGGCGCGC TGGCCGGGCC GCGCGTGCTC GAACACATCG TCGACACGGT GTTGTACTTC GAGGGCGACA CGCATTCCTC GTATCGTCTG GTGCGCGCGA TCAAGAACCG CTTCGGCGCG GTCAACGAAC TCGGCGTGTT CGCCATGACC GAGCGCGGCT TGCGCGGCGT GGCCAATCCG TCGGCGCTGT TTCTGTCGCA GCACGAGCAG TCGGTGCCAG GCTCATGCGT GCTGGTGACG CAGGAGGGCA CGCGGCCGCT GCTGGTCGAA GTGCAGGCCC TCGTGGACTC GGCCAACGCG CCGAATCCGC GCCGTCTTGC GGTCGGCCTG GAGCAGAACC GGCTCGCGAT GCTGCTGGCG GTGCTGCACC GGCATGCCGG CATTGCGTGT TTCGATCAGG ACGTGTTCCT GAACGCGGTG GGCGGCGTGA AGATCACCGA GCCCGCCGCC GACCTGGCCG TGCTGCTCGC GATTCATTCG TCCATGCGCA ACAAGCCGCT GCCCAAGGGG CTGGTGGTGT TCGGGGAAGT GGGCCTCGCC GGCGAGATCC GGCCGTCGCC GCGCGGTCAG GAGCGCCTGA AGGAAGCCGC CAAGCTGGGC TTTTCGGTTG CGGTGATTCC CAAGGCCAAT GCGCCGAAAC AGCCGATCGA AGGCTTACAG GTCGTTGCGG TCGAGCGGAT CGAACAGGCC ATCGACCGGG TCCGCACGCT TGAATAG
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Protein sequence | MAKPKTLYIC SECGGQSPKW AGQCPSCNAW NTLVESVAEA PSTHRFQALA KSAPVRRLAD IEASDVPRFS TGVSEFDRVL GGGLVPGGVV LIGGDPGIGK STLLLQSLAE IAADKRALYI SGEESAAQIA LRAQRLSLLE PGSKASELQL LAEIQLEKIQ ATISEQRPDV AVIDSIQTVY SDALTSAPGS VAQVRECAAQ LTRIAKQSGT TIIMVGHVTK EGALAGPRVL EHIVDTVLYF EGDTHSSYRL VRAIKNRFGA VNELGVFAMT ERGLRGVANP SALFLSQHEQ SVPGSCVLVT QEGTRPLLVE VQALVDSANA PNPRRLAVGL EQNRLAMLLA VLHRHAGIAC FDQDVFLNAV GGVKITEPAA DLAVLLAIHS SMRNKPLPKG LVVFGEVGLA GEIRPSPRGQ ERLKEAAKLG FSVAVIPKAN APKQPIEGLQ VVAVERIEQA IDRVRTLE
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