| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2476 |
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| Symbol | |
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| ID | 6284538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2793968 |
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| End bp | 2795344 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642622030 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_001896096 |
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| Protein GI | 187924454 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0409258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0000251063 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCAAAAC CCAAAACGTT GTACATCTGC AGTGAATGCG GCGGGCAATC GCCGAAATGG
GCCGGCCAGT GCCCCTCGTG CAATGCGTGG AACACGCTGG TCGAGTCGGT GGCGGAAGCG
CCGTCCACGC ACCGTTTCCA GGCGCTCGCG AAGAGCGCGC CGGTGCGCCG TCTCGCCGAT
ATCGAGGCAT CCGATGTGCC GCGCTTTTCC ACCGGGGTGA GCGAGTTCGA CCGCGTGCTC
GGCGGCGGTC TCGTGCCGGG CGGCGTGGTG CTGATCGGCG GCGATCCGGG CATCGGCAAA
TCGACGCTGC TGCTGCAATC GCTCGCGGAA ATCGCTGCCG ACAAACGCGC GCTTTATATC
AGCGGCGAAG AGTCGGCTGC GCAAATTGCG TTGCGCGCGC AACGGCTTTC GTTGCTGGAG
CCGGGTTCGA AGGCAAGCGA GCTGCAATTG CTGGCGGAAA TCCAGCTCGA AAAAATCCAG
GCGACGATCT CCGAGCAGCG GCCCGATGTC GCGGTGATCG ACTCGATCCA AACGGTCTAT
TCCGACGCGC TGACTTCAGC GCCGGGTTCG GTCGCCCAGG TGCGCGAATG CGCGGCGCAA
CTCACGCGCA TTGCCAAGCA GTCGGGCACC ACCATCATCA TGGTCGGCCA CGTGACCAAG
GAAGGCGCGC TGGCCGGGCC GCGCGTGCTC GAACACATCG TCGACACGGT GTTGTACTTC
GAGGGCGACA CGCATTCCTC GTATCGTCTG GTGCGCGCGA TCAAGAACCG CTTCGGCGCG
GTCAACGAAC TCGGCGTGTT CGCCATGACC GAGCGCGGCT TGCGCGGCGT GGCCAATCCG
TCGGCGCTGT TTCTGTCGCA GCACGAGCAG TCGGTGCCAG GCTCATGCGT GCTGGTGACG
CAGGAGGGCA CGCGGCCGCT GCTGGTCGAA GTGCAGGCCC TCGTGGACTC GGCCAACGCG
CCGAATCCGC GCCGTCTTGC GGTCGGCCTG GAGCAGAACC GGCTCGCGAT GCTGCTGGCG
GTGCTGCACC GGCATGCCGG CATTGCGTGT TTCGATCAGG ACGTGTTCCT GAACGCGGTG
GGCGGCGTGA AGATCACCGA GCCCGCCGCC GACCTGGCCG TGCTGCTCGC GATTCATTCG
TCCATGCGCA ACAAGCCGCT GCCCAAGGGG CTGGTGGTGT TCGGGGAAGT GGGCCTCGCC
GGCGAGATCC GGCCGTCGCC GCGCGGTCAG GAGCGCCTGA AGGAAGCCGC CAAGCTGGGC
TTTTCGGTTG CGGTGATTCC CAAGGCCAAT GCGCCGAAAC AGCCGATCGA AGGCTTACAG
GTCGTTGCGG TCGAGCGGAT CGAACAGGCC ATCGACCGGG TCCGCACGCT TGAATAG
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| Protein sequence | MAKPKTLYIC SECGGQSPKW AGQCPSCNAW NTLVESVAEA PSTHRFQALA KSAPVRRLAD
IEASDVPRFS TGVSEFDRVL GGGLVPGGVV LIGGDPGIGK STLLLQSLAE IAADKRALYI
SGEESAAQIA LRAQRLSLLE PGSKASELQL LAEIQLEKIQ ATISEQRPDV AVIDSIQTVY
SDALTSAPGS VAQVRECAAQ LTRIAKQSGT TIIMVGHVTK EGALAGPRVL EHIVDTVLYF
EGDTHSSYRL VRAIKNRFGA VNELGVFAMT ERGLRGVANP SALFLSQHEQ SVPGSCVLVT
QEGTRPLLVE VQALVDSANA PNPRRLAVGL EQNRLAMLLA VLHRHAGIAC FDQDVFLNAV
GGVKITEPAA DLAVLLAIHS SMRNKPLPKG LVVFGEVGLA GEIRPSPRGQ ERLKEAAKLG
FSVAVIPKAN APKQPIEGLQ VVAVERIEQA IDRVRTLE
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