Gene Bphyt_2470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2470 
Symbol 
ID6283314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2786630 
End bp2787514 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content65% 
IMG OID642622024 
ProductN5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 
Protein accessionYP_001896090 
Protein GI187924448 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03533] protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.112991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0000511944 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGCTCC CGTTTTCCAC CGTTCGCGAC CTGCTGCGTT TCGCTGTGTC GCGCTTCAAC 
CAGGCCGAAC TGTCGTTCGG CCACGGCTCG GCCAATGCCT ACGACGAAGC CGTCTATCTG
GTCCTGCACA CGCTGCATCT GCCGCTCGAT CTGCTGGACC CGTTTCTCGA CGCGCGCCTG
ACCGCGGCTG AAATCGACGC CGTGCTGAAC GTGATCGAGC GCCGCGCCAC CGAACGCGTG
CCGGCTGCCT ACATCACGCA GGAAGCCTGG ATGCACGGCT TCCGCTTCCA CGTGGACGAG
CGCGTGATCG TGCCGCGTTC GTTCATCGGC GAATTGCTGC AGGACGGTTT GCAGCCCTAC
GTGGAAGATC CCGAGCAGGT GAGCGCCGTG CTGGAGTTGT GCACCGGTTC CGGGTGCCTC
GCGATTCTCG CCGCGCACGC GTTCCCGAAT GCGGATATCG ACGCCGTGGA TCTGTCCGCG
CCCGCGCTGG AAGTCGCCGC GCGCAACGTC GCGGACTACA AGCTCGATGA CCGCATCGCC
CTGTTCGAAG GCGATCTGTA CGCGCCGCTC GCCGAGCGCC GCTACGACGT GATCATCAGC
AACCCGCCGT ACGTGAACGC GGCGTCGATG CAGGATCTGC CGGCCGAATA CAAGCACGAG
CCGAATATGG CGCTGGCCGG TGGCGTCGAC GGCATGGACA TCGTGCGCCG GATCATCGCC
GACGCGCGCA ACTGGCTGAC CGACGAAGGC GTGCTGGTCG TCGAAATCGG CAACGAGCGG
CAACACGTGG AAGCGGCATT CGGCGGGCTC GATCTCGTCT GGCTTTCGAC CAGTGCCGGC
GACGACAACG TGTTCCTGAT TCAGGCGGCT GATTTGCCGG TTTGA
 
Protein sequence
MTLPFSTVRD LLRFAVSRFN QAELSFGHGS ANAYDEAVYL VLHTLHLPLD LLDPFLDARL 
TAAEIDAVLN VIERRATERV PAAYITQEAW MHGFRFHVDE RVIVPRSFIG ELLQDGLQPY
VEDPEQVSAV LELCTGSGCL AILAAHAFPN ADIDAVDLSA PALEVAARNV ADYKLDDRIA
LFEGDLYAPL AERRYDVIIS NPPYVNAASM QDLPAEYKHE PNMALAGGVD GMDIVRRIIA
DARNWLTDEG VLVVEIGNER QHVEAAFGGL DLVWLSTSAG DDNVFLIQAA DLPV