| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2462 |
|---|
| Symbol | |
|---|
| ID | 6281899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2775999 |
|---|
| End bp | 2777288 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642622016 |
|---|
| Product | ZipA FtsZ-binding region |
|---|
| Protein accession | YP_001896082 |
|---|
| Protein GI | 187924440 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00887227 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.000175351 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAGT TGACACTCGG TTTGATCGGC GCGGGTGCCG TGGTGGTCGG GGGCGTGGTC
GTGTACAACG CGTGGCAGAG CGCGAAGGTG CGCCGCAAGA TGCCGCGGCC GATGCCGGCC
GACGCCGCCG AAAATCTCGC GCGGGACGAT CAGGAGGAAC AGAGTCCGTT CATCGAACCG
GCCCGGCCGA CCACGCGCCG TGAGCCGGTG GTGGGCGCCG AAACCGCGGA GCAACCCGCG
GCGGCGCGCG TCGAACCAAC GTTCGGTGGC CAGGCGGCCG GCACGGCGCC GCTCGACACG
GCGGCCGATA TTCAGGCCGA GACGACCACG CCGAACGGTT ATCCGGAAGC CGAGGGCGTG
GCCGAAGCCG AACGCGAGGC GAGCGCCGAA ACCGCGCAGG CCCGCCAGTC CGGCGAACCC
GTCGAACCCG TCGAACCGAT TCTGCCCGCT GCCACGACGA TCTCATCGGC GCCGCCGGCT
ATCGTCGATC GCCGCATCGA CTGCATCGTG CCGATCCGTT TGAACGGTCC GGTCGCGGGC
GACAAGGTGA TTCCGCTCGC GCAGCGTCTG CGCCGCGCGG GCAGCAAGCC GGTGCATATC
GAGGGCAAGC TCGAAGGCGG CGCGTGGGAG CTGCTGCAAA ACGGCGCGCG CTACGAAGAA
CTGCGCGCGG CCGCGCAACT GGCCAATCGC AGCGGTGCCC TCAACGAACT GGAGTTTTCC
GAATTCGTGA CCGGCGTGCA GCAGTTCGCC GACGCGCTGG ATGCATCGCC GGAATTCCCG
GACATGCTCG AAACGGTGGC GATGGCGCGC GAGCTCGACG GCTTTGCCGC GCAGTGCGAC
GCGCAGTTGT CGATCAACGT GCTCTCCGAC GGCGCGCCGT GGTCGGCCAA CTACGTGCAG
GCGGTCGCGT CGCAAGACGG CTTGCTGCTC TCGCGCGACG GCACGCGTTT CGTCAAGCTC
GACTCGAAGC AAAGCCCGGT GTTCATGCTG CAATTCGGCG ACACCAACTT TTTGCGCGAC
GACCTCACCT ACAAGGGCGG TCAGATGATC ACGCTGGTGC TCGACGTGCC GGTGGCCGAT
GAAGACATTC TGCCGTTCCG TCTGATGTGC GACTACGCGA AATCGTTGGC CGAGCGCATC
GGTGGGCGAG TGGTCGACGA CGGCCGCCGT CCGTTGCCGG AAACCGCGCT GCTCGCCATC
GAAAAGCAGT TGATGACGCT CTACGCGAAG CTCGAACAGG CGGGCATTCC GGCAGGCTCG
CCGGCCACGC GGCGCTTGTT CAGCCAGTAA
|
|---|
| Protein sequence | MDELTLGLIG AGAVVVGGVV VYNAWQSAKV RRKMPRPMPA DAAENLARDD QEEQSPFIEP
ARPTTRREPV VGAETAEQPA AARVEPTFGG QAAGTAPLDT AADIQAETTT PNGYPEAEGV
AEAEREASAE TAQARQSGEP VEPVEPILPA ATTISSAPPA IVDRRIDCIV PIRLNGPVAG
DKVIPLAQRL RRAGSKPVHI EGKLEGGAWE LLQNGARYEE LRAAAQLANR SGALNELEFS
EFVTGVQQFA DALDASPEFP DMLETVAMAR ELDGFAAQCD AQLSINVLSD GAPWSANYVQ
AVASQDGLLL SRDGTRFVKL DSKQSPVFML QFGDTNFLRD DLTYKGGQMI TLVLDVPVAD
EDILPFRLMC DYAKSLAERI GGRVVDDGRR PLPETALLAI EKQLMTLYAK LEQAGIPAGS
PATRRLFSQ
|
|---|
| |