Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2454 |
Symbol | tsf |
ID | 6282462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2765091 |
End bp | 2765972 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642622008 |
Product | elongation factor Ts |
Protein accession | YP_001896074 |
Protein GI | 187924432 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.050391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.000441551 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGGCAA TTACCGCAAG CATGGTTGCA GAACTGCGCG CAAAGACCGA CGCGCCGATG ATGGAATGCA AGAAGGCGCT GACGGAAGCC GACGGCGACA TGGCGCGCGC TGAAGAGCTG CTGCGGGTGA AGCTGGGCAA CAAGGCCAGC AAGGCAGCGT CGCGCGTGAC GGCTGAAGGC GTGGTCGCCT CGTTCATCGG CGGCAACGCG GGTTCGCTGG TCGAGTTGAA CTGCGAAACC GACTTCGTTT CGAAGAACGA CGACTTCCTG GGTTTCTCGA AGAAGGTCGC TGAGCTGGTC GCCACGCAAA ATCCGGCTGA CGTCGCAGCG CTGGCGGCAC TGCCGCTGGA CGGCTCGACG GTCGACGCAG TGCGTCTGGC ACTGGTCGGC AAGATCGGTG AAAACCTGTC GATCCGCCGT TTCGTGCGCT TCGAAACCTC GAACAAGCTG GCAGCGTACC TGCACGGCAC GCGTATCGGC GTGCTGGTCG AGTACACCGG CGCGGACGAG CAGGTCGGCA AGGACGTGGC AATGCACATC GCCGCGATGA AGCCGGTTTC GCTGTCGTCG GACGACGTGC CGGCGGATCT GATCGCCAAG GAACGCAGCA TTGCTGAACA GAAGGCCGCC GAATCGGGCA AGCCGGCTGA AATCGTCGCC AAGATGGTCG AGGGCAGCGT GCAGAAGTAT CTGAAGGAAG TGTCGCTGCT GAACCAGACG TTCGTTAAGA ACGACAAGCA GACGATCGAA CAGATGCTGA AGGCTGGCAA TTCGAGCGTG CAGAAGTTCG CGCTGTTCGT GGTCGGCGAA GGCATCGAGA AGAAGCAGGA CGACTTCGCA GCCGAAGTGG CCGCGCAAGT GGCTGCTGCA AAGCAACAAT AA
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Protein sequence | MAAITASMVA ELRAKTDAPM MECKKALTEA DGDMARAEEL LRVKLGNKAS KAASRVTAEG VVASFIGGNA GSLVELNCET DFVSKNDDFL GFSKKVAELV ATQNPADVAA LAALPLDGST VDAVRLALVG KIGENLSIRR FVRFETSNKL AAYLHGTRIG VLVEYTGADE QVGKDVAMHI AAMKPVSLSS DDVPADLIAK ERSIAEQKAA ESGKPAEIVA KMVEGSVQKY LKEVSLLNQT FVKNDKQTIE QMLKAGNSSV QKFALFVVGE GIEKKQDDFA AEVAAQVAAA KQQ
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