| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2449 |
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| Symbol | |
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| ID | 6282080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2760619 |
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| End bp | 2761824 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642622003 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_001896069 |
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| Protein GI | 187924427 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00208948 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAAAAC GTCTGACATT GCTCGGTTCC ACGGGCTCGA TTGGAGACAG CACGCTCGAC
GTCGTCGCGC GTCATCCCGA GCGTTTTTCG GTTTATGCGC TCACCGCGCA TCGCAACGGC
GACAAGCTCG TCGAGCAATG CCTGCGCTTT CAGCCTGAAG TTGCGGTGGT CGGCGACGCC
GACACGGCCG CGAGCGTCGC GGCGAAACTG CGCGAAGCGG GTTGCAAGAC CGAGATCACG
TATGGACCGC AGGCGCTCGT CGACGTGTCG AAGAGCGACG GCTGCGATAC GGTGGTCGCG
GCGATCGTCG GCGCGGCCGG CCTTGCGCCG AGCCTTGCCG CCGCGCGCGC CGGCAAGCGC
ATCCTGCTCG CCAACAAGGA AGCGCTGGTC ATGTCCGGCG CGATCTTCAT GGACGCGGTG
CGCGACAACG GCGCCGTGCT GCTGCCGGTC GACAGCGAAC ATAACGCGAT TTTCCAGTGC
CTGCCGCGCG AAGCCGCGCT GCACGGCGGC GTCTCCAAGA TCATTCTGAC TGCGTCGGGC
GGCCCGTTCC GCACGCGCGA GCCGGCTACG CTCGTCGAGG TCACGCCGGA CGAAGCCTGT
AAGCATCCGA ACTGGGTCAT GGGCCGCAAG ATTTCGGTCG ACTCGGCCAC CATGATGAAC
AAGGGCCTCG AAGTGATCGA GGCGCACTGG CTGTTCAATC TGCCGGGCGA GCGCATCGAG
GTGCTGATTC ACCCGCAAAG CGTGATCCAT TCGATGGTGT CCTACGCCGA CGGCTCGGTG
CTTGCGCAAC TCGGCAATCC CGATATGCGC ACGCCGATCG CGCATGCGCT GGCGTTTCCG
GATCGCGTCG ATTCGGGCGT GGCGCAACTC GATCTGCTGC AGGTCGCGTC CCTCTCGTTC
GAAAAGCCGG ATTACACGCG CTTTCCATGT CTGGCGCTGG CAGTGAAGGC GCTGGCCGAA
GGCGGTTTGG CAAGCGCGGC ACTGAACGCC GCGAACGAGA TTGCGGTTGA AGCGTTCCTC
GCGCGCCAGA TCGGTTTCAT GGCGATTGCC CAGGTGGTCG ACGCGGTGCT CAACGCGTTG
CCGAACCGCA GCGCACACGC GCTCGAAGAC GTGATCGAAG CCGATGCCGC CGCGCGTCGC
GCCGCGGCCG AATTCATCGC GCGTCTGCCC GACGGCGCCC GTCGCACGGA ACGCGCCGTC
CAGTGA
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| Protein sequence | MQKRLTLLGS TGSIGDSTLD VVARHPERFS VYALTAHRNG DKLVEQCLRF QPEVAVVGDA
DTAASVAAKL REAGCKTEIT YGPQALVDVS KSDGCDTVVA AIVGAAGLAP SLAAARAGKR
ILLANKEALV MSGAIFMDAV RDNGAVLLPV DSEHNAIFQC LPREAALHGG VSKIILTASG
GPFRTREPAT LVEVTPDEAC KHPNWVMGRK ISVDSATMMN KGLEVIEAHW LFNLPGERIE
VLIHPQSVIH SMVSYADGSV LAQLGNPDMR TPIAHALAFP DRVDSGVAQL DLLQVASLSF
EKPDYTRFPC LALAVKALAE GGLASAALNA ANEIAVEAFL ARQIGFMAIA QVVDAVLNAL
PNRSAHALED VIEADAAARR AAAEFIARLP DGARRTERAV Q
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