| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2445 |
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| Symbol | lpxD |
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| ID | 6282076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2755063 |
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| End bp | 2756175 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642621999 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_001896065 |
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| Protein GI | 187924423 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.229402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0125166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTTA CGCTCGAGGA CATCGTCCAG CGGTTCGGCG GTGAAGTAGT CGGAGACGGT
TCGCAGCGCG TCGGCAGTCT CGCGCCGCTC GACCAGGCAG GCCCGGACCA GCTGGCGTTC
CTCGCCAATC CGAAGTACCT GGCGCAGGTC GAAACGACCC GTGCGGGCGC GGTGTTGATT
AACGCCGACG ACCTCGCCAA GCTCGCTTCC CGCGAAAATC GTAACTTCAT CGTCACGCCC
AATCCGTACG CTTACTTCGC GCGCGTCGCG CAAACCTTCA TCGACCTCGC TGCGCCCAAG
GCGGCGCCCG GCGTGCATCC GAGCGCAACT ATCGACCCGT CGGCGCAGAT CGCCGCGAGC
GCGGTGATCG GCCCGCACGT CACCGTGGAA GCGGGCGCGG TGATCGGCGA CAACGTGCGG
CTCGACGCCA ATGTCGTGAT CGGCCGTGGC ACGCGCATCG GCGCGGGGTC GCATCTCTAT
CCCAATGTCG CGGTGTATCA CGGTTGCAAG CTTGCCGAGC GCGTCATCGT GCACGCGGGC
GCGGTGATCG GCTCGGACGG TTTCGGCTTC GCGCCGGATT TCGTCGGCGA AGGTGAGGCG
CGTACCGGTA GCTGGGTGAA GATTCCGCAG GTCGGCGGTG TGTCGATCGC GGCAGACGTC
GAAATCGGCG CGAACACCAC CATCGACCGT GGCGCCATGG CGGACACGAT CATCGAAGAG
TGCGTGAAGA TCGACAACCT CGTGCAGATC GGCCACAACT GCAAAGTCGG CGCTTATACG
GTGATTGCCG GCTGCGCGGG CATTGCGGGC AGCACGACCA TTGGCCGCCA TTGCATGATC
GGCGGCGCGG TCGGGATCGC CGGACACGTC ACGCTGGCCG ACTATGTGAT CGTCACCGCC
AAGTCGGGCG TCTCGAAGTC GCTGCTCAAG CCTGGTATGT ACACCAGTGC CTTCCCGGCC
GTGAACCATG CAGACTGGAA CAAGAGCGCG GCGTTGCTGC GCAATATCGA CAAACTCCGC
GATCGTATCA AGACGCTTGA AAACGCCGCG GCTGAGAAGC GGGACGGCCC GGCGCCCAAC
GCAGCAAGCA AGGCCACAGG CGACAAAGTC TGA
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| Protein sequence | MAFTLEDIVQ RFGGEVVGDG SQRVGSLAPL DQAGPDQLAF LANPKYLAQV ETTRAGAVLI
NADDLAKLAS RENRNFIVTP NPYAYFARVA QTFIDLAAPK AAPGVHPSAT IDPSAQIAAS
AVIGPHVTVE AGAVIGDNVR LDANVVIGRG TRIGAGSHLY PNVAVYHGCK LAERVIVHAG
AVIGSDGFGF APDFVGEGEA RTGSWVKIPQ VGGVSIAADV EIGANTTIDR GAMADTIIEE
CVKIDNLVQI GHNCKVGAYT VIAGCAGIAG STTIGRHCMI GGAVGIAGHV TLADYVIVTA
KSGVSKSLLK PGMYTSAFPA VNHADWNKSA ALLRNIDKLR DRIKTLENAA AEKRDGPAPN
AASKATGDKV
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