| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2442 |
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| Symbol | lpxB |
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| ID | 6284042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2752299 |
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| End bp | 2753468 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642621996 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_001896062 |
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| Protein GI | 187924420 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.108116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0237275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTGC AACCCAGTCC CTTGCGCGTC GCGATGGTGG CCGGCGAGCC GTCCGGCGAC
CTGCTGGCGG CCTCGCTGCT CGACGGCCTC ACGAGCCGTC TGCCCGCCGG CACCCAGTAC
TACGGGATCG GCGGCCCACG CATGATCGCG ACGGGCTTCG ACGCCCACTT TCCGATGGAA
AAGCTCTCGG TGCGCGGCTA TGTCGAGGCG CTGAAGCATA TTCCCGGCAT TCTCGGCATT
CGCAACGAAC TGAAGAGGCA GTTGCTGGCA GAGCCGCCGT CGGTGTTCGT CGGCGTGGAC
GCGCCCGATT TCAATTTCGG GCTCGAGCAT CCGTTGCGCG AGGCCGGGAT TCCAACCGTT
CACTTCGTGT GCCCGTCCAT CTGGGCGTGG CGCGGCGGCC GCATCAAGAA GATCGCCAAG
GCGGTCGACC ACATGCTGTG CGTGTTCCCG TTCGAAACGG CGCTGCTGGA AAAAGCGGGC
GTCGCGGCAT CGTATGTGGG CCATCCGCTC GCTGACGAAA TTCCGCTCGT GCCGGACACG
CTCGGCGCGC GCCGGGCACT CGGTCTCGCA CAAGACGGTC CGATCATCGC GGTGCTGCCG
GGCAGCCGAC GCTCGGAGAT CGATCTGATC GGCCCGACGT TCTTCGCCGC GATGGAAATG
ATGCAGCACC AGGAGCCGAA TCTGCGCTTC GTGATGCCGG CGGCCACGCC GGCGCTGCGC
GAAATGCTGC GGCCGCTGGT CGATTCGCAC CCGGGCCTTG CGCTGACGAT TACCGACGGC
CAGGCTCAAC TCGCCATGAC CGCAGCCGAC GCGATCCTCG TGAAGAGCGG CACCGTAACG
CTCGAAGCCG CGCTGCTGAA AAAGCCCATG GTGATCTCGT ACAAGGTGCC CTGGCTGACC
GGCCAGATCA TGCGCCGCCA GGGCTATCTG CCGTATGTTG GGCTGCCGAA TATTCTGGCG
GGGCGCTTCG TGGTGCCGGA GATCCTGCAG CACTTCGCCA CCCCGCAGGC GTTGGCCGAA
GCCACGCTGA AACAGTTGCG CGACGAGACC AACCGGCGCA CGCTGACGGA AATCTTCACG
GAGATGCATC ACGTGCTGAA GCAAAACACC GCGCAGCGTG CGGCGGAAGT CGTGGCGAGC
GTCATCGAAA AGCGCAAGGG GCGGCCGTGA
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| Protein sequence | MALQPSPLRV AMVAGEPSGD LLAASLLDGL TSRLPAGTQY YGIGGPRMIA TGFDAHFPME
KLSVRGYVEA LKHIPGILGI RNELKRQLLA EPPSVFVGVD APDFNFGLEH PLREAGIPTV
HFVCPSIWAW RGGRIKKIAK AVDHMLCVFP FETALLEKAG VAASYVGHPL ADEIPLVPDT
LGARRALGLA QDGPIIAVLP GSRRSEIDLI GPTFFAAMEM MQHQEPNLRF VMPAATPALR
EMLRPLVDSH PGLALTITDG QAQLAMTAAD AILVKSGTVT LEAALLKKPM VISYKVPWLT
GQIMRRQGYL PYVGLPNILA GRFVVPEILQ HFATPQALAE ATLKQLRDET NRRTLTEIFT
EMHHVLKQNT AQRAAEVVAS VIEKRKGRP
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