| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2427 |
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| Symbol | |
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| ID | 6281046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2730945 |
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| End bp | 2732000 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642621981 |
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| Product | ABC sugar transporter, periplasmic ligand binding protein |
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| Protein accession | YP_001896047 |
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| Protein GI | 187924405 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.436825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTCG GCAATGGCAA GGCATCCAGA GCATCGCTCA GGGTTCTGGT GGCAGCACTG
GCACTCACTG CGGGGTTTGC TGCGCAGCCG GCGGCGCGCG CGGTGGACGC TCACTTCGTG
TTGGTCAGCC ACGCACCGGA TTCGGACACG TTCTGGAACA CGATCAGAAA CGCTATTGAG
CAGGCCGATG AGGACTTCAA CGTCGAGACC GACTACCGCA ACCCGCCGAA CGGCGATCTC
GCGGACATGT CCCGCCTGAT CGAGCAGGCG GCGGCGCGCA ATTATGATGG CGTGATTACG
ACGATCGCCG ACTTCGACGT GTTGAAGAGT TCCATCGAAA AGGTGACCGC GAAGAAGATC
GCGCTCGTGA CGATCAACTC CGGCACCAAT GAACAAAGCG CGCAACTCGC CGCGATCATG
CACATTGGTC AGCCCGAATA TCTGGCGGGC AAGGCGGCCG GCGAGAAAGC CAAAGCCGCG
GGCGTGAAGA CGTTTCTGTG CGTGAACCAC TTCGCGACCA ATCCGGTTTC ATTCGACCGT
TGCCGTGGTT TTGCGGATGC GATCGGCGCC GACTACAAGA CTTCCACGAT CGACTCGGGC
CAGGACCCGA CCGAGATCCA ATCGAAGGTC AGTGCCTATT TGCGCAACCA TCCGAAAACG
GATGCGGTCC TCACGCTCGG GCCGCCACCT GCGTCGGCGA CGCTCAAAGC TATCGACCAG
ATGGGCATTG CGGGTAAGAT TTTTTTCTGC ACGTTCGATT TCTCCGACGA AATCGCAAAG
GCCATTCGGG ATGGGACGAT TGCTTTCGCG ATCGACCAGC AGCCCTATCT CCAGGGTTAT
ATGGCGGTGG CGGTCCTCGC GATCGCGAAG AAGGAGCGCA CCACCGATCC CGTCAAGATC
CGCCAGGTGC TCAAAGAGAA TGTGAAATTC AAAGCGCGGT TGGAGATGTA CGGCCTCGAA
CCGTCGTATG GGCCGAAGAA CATTCGCTCG GGACCGAGCT TCATTACAAA GGCCAATCTG
GACAAAGTGG TGAAGTACGC GGGCCAGTAC CGTTGA
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| Protein sequence | MTLGNGKASR ASLRVLVAAL ALTAGFAAQP AARAVDAHFV LVSHAPDSDT FWNTIRNAIE
QADEDFNVET DYRNPPNGDL ADMSRLIEQA AARNYDGVIT TIADFDVLKS SIEKVTAKKI
ALVTINSGTN EQSAQLAAIM HIGQPEYLAG KAAGEKAKAA GVKTFLCVNH FATNPVSFDR
CRGFADAIGA DYKTSTIDSG QDPTEIQSKV SAYLRNHPKT DAVLTLGPPP ASATLKAIDQ
MGIAGKIFFC TFDFSDEIAK AIRDGTIAFA IDQQPYLQGY MAVAVLAIAK KERTTDPVKI
RQVLKENVKF KARLEMYGLE PSYGPKNIRS GPSFITKANL DKVVKYAGQY R
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