| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2415 |
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| Symbol | |
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| ID | 6283360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2717837 |
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| End bp | 2719390 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642621969 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_001896035 |
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| Protein GI | 187924393 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCT CGACGCAACT TGCACCGCCG CCGCTGACAG GCGGCAAACT GGTTCTCGCG
ACACTCGCCG TCGCGCTCGC GACGTTCATG AACGTGCTCG ATTCGTCCAT TGCCAATGTG
GCCATTCCAA CCATCTCGGG CAATCTCGGT GTCTCCGTCG ACGAAGGCAC TTGGGTGATC
ACGCTATTCT CGGCGGCCAA TGCCGTGGCG ATTCCGCTTA CGGGGTGGCT GACGCAGCGT
GTTGGTCAGA TCAGACTATT CGTGAGCGCG ATCCTGTTGT TTGTATTCTC GTCGTGGCTG
TGCGGCATCG CGCCGAATTT GATCGTACTA CTCGCGGCGC GCGTATTGCA GGGCGCGGTC
GCGGGCCCGC TGATTCCGCT CTCACAGGCC ATTCTGCTCG GCTCGTATCC AAAGGAAAGA
AGTTCGACGG CGCTTTCGCT CTGGGCGATG ACGGCAACGG TCGGGCCGAT TGCGGGTCCG
GCGCTGGGCG GCTGGATTAC CGACAGCTAT AGCTGGTCGT GGATCTTCTA TATCAACATT
CCCGTGGGCC TGTTCGCCGC CGCCGTGACC TGGATGATCT ATCGGGACCG CGACTCGTCG
ACGCGCAAGC TTCCCATCGA CAAGGTCGGC CTGCTGTCAC TGATCGCATG GGTCGCGTCG
CTCCAGATCA TGCTGGACAA GGGCAAGGAT CTCGACTGGT TCAACTCGCC GGTGATCTGC
GTACTCGCTG TCGTTGCCGG CATCAGCTTC CTGTTCTTCC TGATCTGGGA ATTCACGGAG
AAGAATCCAA TCGTGGAGCT GCGTCTTTTC GCAGGGCGCA ATTTCCGTGG CGGCACGATT
GCGATCTCGG TAGCGTACGC CGTATTCTTC TCGAACCTCG TGATCTTGCC CCAGTGGATT
CAGGGCTATC TCGGCTATCG TTCAGTGGAT GCCGGTCTCG TGACGGCGCC GCTCGGCATC
TTCGCGGTGC TGCTCGCCCC CGTGATGGCG AAGATCATGC CGAAGTCCGA CGCACGGGTA
CTCGCGACTC TGGCGTTCCT CGGTTTTGCG GGCGTGTTCT TTATGCGTTC GCATTACACA
ACCAGCGTCG ATCCCTATAC CCTGGTGCTG CCGACGCTGT TGCAGGGCAT TCCGATGGCA
CTCTTCTTTA CGCCGCTCAC CGCGATCATC CTGTCGGGAC TGTCGCCCGA GAGGATTCCG
GCGGCCGCGG GCCTGTCCAA TTTCGTGCGC GTATTCGCGG GCGGCGTCGG CACGTCGTTG
ATCTCGACGG GCTGGAACGA CCGTACGATT CTGCACCATG CGCAACTCGC CGAACAGTCG
AGCGTGAATA ACCCTAGCTA CATGAGCGCT ATTGCGAACC TCCAGACGAT ACTCGGCGGC
AATCTGGAGC AGGCCACGGC GTTTTTCGAA CGTTCGCTGA ATGCACAGGC CGCGATGCTC
GGGCTGAACG ATATTTTCTG GCTCTCTTCA CTGATTTTCA TCGTGATCAT TCCGCTGGTC
TGGCTGACGA GACCCGGCAA GGTCGATGGC GGCGCGGCGG CCGGCGCGCA CTAA
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| Protein sequence | MNPSTQLAPP PLTGGKLVLA TLAVALATFM NVLDSSIANV AIPTISGNLG VSVDEGTWVI
TLFSAANAVA IPLTGWLTQR VGQIRLFVSA ILLFVFSSWL CGIAPNLIVL LAARVLQGAV
AGPLIPLSQA ILLGSYPKER SSTALSLWAM TATVGPIAGP ALGGWITDSY SWSWIFYINI
PVGLFAAAVT WMIYRDRDSS TRKLPIDKVG LLSLIAWVAS LQIMLDKGKD LDWFNSPVIC
VLAVVAGISF LFFLIWEFTE KNPIVELRLF AGRNFRGGTI AISVAYAVFF SNLVILPQWI
QGYLGYRSVD AGLVTAPLGI FAVLLAPVMA KIMPKSDARV LATLAFLGFA GVFFMRSHYT
TSVDPYTLVL PTLLQGIPMA LFFTPLTAII LSGLSPERIP AAAGLSNFVR VFAGGVGTSL
ISTGWNDRTI LHHAQLAEQS SVNNPSYMSA IANLQTILGG NLEQATAFFE RSLNAQAAML
GLNDIFWLSS LIFIVIIPLV WLTRPGKVDG GAAAGAH
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