Gene Bphyt_2412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2412 
Symbol 
ID6283357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2714685 
End bp2715464 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content57% 
IMG OID642621966 
Productacetoacetate decarboxylase 
Protein accessionYP_001896032 
Protein GI187924390 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4689] Acetoacetate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.652307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAG AAGATATCCG CAAGAACGCG TTTGCGATGC CGGTGCACAA CCCCGCCTAT 
CCGCGTCCGC CGTTCCGTTT CGTCAATCGG GAATACTTCA TCATCTCGTA TGAGACGGAT
ATGAATGCGC TCGAGGCCGT TGTTCCCGAG CCGCTGATGG TCGACAAGCC GATCGTTCAC
TACGAGTTCA TTCGTATGCC GGATTCTTCG GGGTTCGGCG ACTACACGGA AAGCGGGCAG
GTCATTTCCG TTCTCGACGC GGATGGAAAT CGCGCCAATT TTACGCACGC GATGTTTCTG
GATGACGAAG GCCCCATCGC CGGCGGACGG GAAATCTGGG GGTTTCCGAA GAAACTCGCT
TCGCCCAAGC TATGCGTCGA CGGCAAGGAC ACGTTGCTCG GCACGCTCGA CTATGGGACG
CAGCGTATCG CTACAGGAAC GATGGGCTAC AAGTTTCGCG CACTCGATAC AGCCGCGGAA
TGCCGCAAGC TTGCCGACAC GCCGAACTAT TTGCTCAAGG TCATTCCCCA TGTCGACGGA
TCGGTGAGAA TTTGCGAACT GGTCCGCTTC TTTTTACGCG ATGTCGAGGT TATCGGCGCG
TGGGAAGGTC CGGCAGCGCT CGAACTGAAT CCGCACGCTC TCGCGTCGGT CACCGATCTG
CCCGTTCGCA GGGTTATCGG CGCACGTCAC GTCATTGCCC ATCTCACACT CGATGTGGGT
GAGGTGGCCT ATGACTATCT TGCTCCCGCG GAGTCGATGA AACTCGCGGT CAACCAGTAA
 
Protein sequence
MTEEDIRKNA FAMPVHNPAY PRPPFRFVNR EYFIISYETD MNALEAVVPE PLMVDKPIVH 
YEFIRMPDSS GFGDYTESGQ VISVLDADGN RANFTHAMFL DDEGPIAGGR EIWGFPKKLA
SPKLCVDGKD TLLGTLDYGT QRIATGTMGY KFRALDTAAE CRKLADTPNY LLKVIPHVDG
SVRICELVRF FLRDVEVIGA WEGPAALELN PHALASVTDL PVRRVIGARH VIAHLTLDVG
EVAYDYLAPA ESMKLAVNQ