Gene Bphyt_2408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2408 
Symbol 
ID6283816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2710206 
End bp2710925 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content56% 
IMG OID642621962 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001896028 
Protein GI187924386 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.616889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGGA AAAACGCGAG CGTATCGCAA CCAAGAAAGT CACCCCGCCA GGCTCGCTCT 
GCAAGCACAC TCGAAACGGT GTTGGAAGCA ACGGTGCAAG TCATTCTGCT AGACGGTCCG
AAGAAGCTGA CGACCACTCG AGTAGCCTAT CGTGCCGGAT TTTCTGTCGG CACCGTCTAC
CAGTATTACG CAAATAAAGA TTCGCTTCTT TATGCTGTCG TGCAGCGACA TTTGCAGCGA
GTGGCAAATG CAGTCGAGGC CGCGTGTCTT GGGCTTCATC GATGTTCACT CGACCGAATG
GTGGCCGGCT TTGTCGACTC GTTCTTTACG GCATCGACGG CACAGAATCT GGAGGCAAGA
GCGTTCTACC TCGTCTGGCC GGAACTGGAC ACCGGTGAGC TGGTTCAGGA GACGTATCGT
CGACTCGAGT CGGCAACCGT TGCGATGCTG GCGAGTTCGA GCCGCCTGGA AGGCGAACAA
CTGCCGGTCG TTGCATTCAT GCTGACTTCA ACACTACTGG GATCGACACG TCTTGCCTTT
GAGCAGCATG CGTCGGATCA CCTGATGCAG CTGCTTCGCA AGCAATTGAC GACGATGTGC
GGCGCTTACG TGTCATCGAT AGCATCAGGA CAGTCCGCCT TGAATAAATG CGGAAACGAG
ACAGGTGTTA GCGCTGCCGC GCCGGAAGAA GTGAGCATCG ACGTGCGCGC ATCGAGCTGA
 
Protein sequence
MRRKNASVSQ PRKSPRQARS ASTLETVLEA TVQVILLDGP KKLTTTRVAY RAGFSVGTVY 
QYYANKDSLL YAVVQRHLQR VANAVEAACL GLHRCSLDRM VAGFVDSFFT ASTAQNLEAR
AFYLVWPELD TGELVQETYR RLESATVAML ASSSRLEGEQ LPVVAFMLTS TLLGSTRLAF
EQHASDHLMQ LLRKQLTTMC GAYVSSIASG QSALNKCGNE TGVSAAAPEE VSIDVRASS