Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2408 |
Symbol | |
ID | 6283816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2710206 |
End bp | 2710925 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642621962 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_001896028 |
Protein GI | 187924386 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.616889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCGGA AAAACGCGAG CGTATCGCAA CCAAGAAAGT CACCCCGCCA GGCTCGCTCT GCAAGCACAC TCGAAACGGT GTTGGAAGCA ACGGTGCAAG TCATTCTGCT AGACGGTCCG AAGAAGCTGA CGACCACTCG AGTAGCCTAT CGTGCCGGAT TTTCTGTCGG CACCGTCTAC CAGTATTACG CAAATAAAGA TTCGCTTCTT TATGCTGTCG TGCAGCGACA TTTGCAGCGA GTGGCAAATG CAGTCGAGGC CGCGTGTCTT GGGCTTCATC GATGTTCACT CGACCGAATG GTGGCCGGCT TTGTCGACTC GTTCTTTACG GCATCGACGG CACAGAATCT GGAGGCAAGA GCGTTCTACC TCGTCTGGCC GGAACTGGAC ACCGGTGAGC TGGTTCAGGA GACGTATCGT CGACTCGAGT CGGCAACCGT TGCGATGCTG GCGAGTTCGA GCCGCCTGGA AGGCGAACAA CTGCCGGTCG TTGCATTCAT GCTGACTTCA ACACTACTGG GATCGACACG TCTTGCCTTT GAGCAGCATG CGTCGGATCA CCTGATGCAG CTGCTTCGCA AGCAATTGAC GACGATGTGC GGCGCTTACG TGTCATCGAT AGCATCAGGA CAGTCCGCCT TGAATAAATG CGGAAACGAG ACAGGTGTTA GCGCTGCCGC GCCGGAAGAA GTGAGCATCG ACGTGCGCGC ATCGAGCTGA
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Protein sequence | MRRKNASVSQ PRKSPRQARS ASTLETVLEA TVQVILLDGP KKLTTTRVAY RAGFSVGTVY QYYANKDSLL YAVVQRHLQR VANAVEAACL GLHRCSLDRM VAGFVDSFFT ASTAQNLEAR AFYLVWPELD TGELVQETYR RLESATVAML ASSSRLEGEQ LPVVAFMLTS TLLGSTRLAF EQHASDHLMQ LLRKQLTTMC GAYVSSIASG QSALNKCGNE TGVSAAAPEE VSIDVRASS
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