| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2399 |
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| Symbol | |
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| ID | 6282249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2701484 |
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| End bp | 2703673 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642621954 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001896020 |
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| Protein GI | 187924378 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.380948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTGGA CAACCGCAGC AAGGCAGCGT GCGATCACAG TGACAGTGAA CGGGATGTTT
TGCGCGGCGA CAGCCGGTCA TGCGTATGCA CAGGTGGCAC AATCAGCGAA CGACAATGTG
AAACCCGAGG TCACGCTGTC GGAGATTAAA GTGCAAGACG CGGCAAACGC GGCGTCCGTC
GGGCTCGTCG GCAAACGCAC CGCGACCGGC ACGAAGACCG ACACACCGAT CACCGAAGTC
CCGCAAACGA TCAACGTCGT CACCGAGCAG CAGATTGAAA TGACTGGCGC AACCGACCTC
AATCAGGCGC TGCGCTACGT GCCAGGCTTC GCATCGTTTG GATCCGACAG CCGCACAGAC
CTGTATGCGG TGCTGCGCGG CTTTACACCC ACCTTGTTCA TCGACGGATT GCAAGCGCCG
AATACAACGC CCATCGCGAG TTGGCGCGTC GACCCGTACA TGATCGACAG CATCACTGTG
CTACGCGGGC CGACATCGGT TCTGTATGGA GCAGGAGATC CGGGCGCGAT CGTCGACGTG
CAAACCAGGC GAGCCGACGG CGAGCGCGTG CGTGAGGCGG ATGTGCAGTT CGGCAACTCT
GCGCGCAAGC AGATCATGTT CGACATCGGC GACAGGCTGG ACGCCGATGG CAAGTACGCG
TATCGCTTCG TTGGCGACGC GCGCGACGGC AACGCGGTGA CCGGGCCGAA TGCGGACCGG
CGCGTCGCGC TTGCGCCGTC GTTTCGCTGG CGACCGGATT CCGGCACTTC CCTCACGCTC
ACGGCGACCT ACCTGCAAGA CTGGAATGAT ATTTCGCATA ACTTCCTGCC CGCGCAGGGC
ACCGTAGTGC CCAACCCGAA TGGGCAGTTG TCGCATGACG TCTACACGGG AGACCCCACA
TTCAATGACT ACCGCAAGAA GCAGTGGTCC CTCGGCTACC AGTTCTCGCA CGACCTCGAT
ACCATCTGGA CGTTGACCCA GAACCTGCGC TGGATGCACC TTTCTCTCAG TGACGCGTCG
GTCTTTGGCG GCGGCCTTGC CCAAGGCAGC ACGACCGATA TCACGCGTTA TGCAGGGCTG
TTTCAGCCCA ACTACAGCCG CTTCGACATC GACAACAACG CGCAGGCACG TTTTGGTACC
GGCCAACTCG AGCATATTGT GCTGCTCGGC TTTCAGTACA ACCGGCAGAC GACGATTAAC
AGCGTGTGGC TCGCGTTGGC GCCGGAGCTG AACATCTACA ATCCGGTCTA CACACCGGTC
ACGAGTGCGA TTTTCTCGAG CCCCGCGTCG CTCGGCCACC AGGACCAGTA CACCACGATG
AACACATTCG GCGTGTACGC GCAGGAACAG CTCAAATGGA ATCGCTGGAC CTTGACGTTC
GGCGGCCGTG AGGATTGGGT CGACACGCAT CTGGACGACC ACGAGGCCAG TACGCAAACG
AAACAGGATG TCAGCGCGTT TTCCGGTCGC GTCGGCCTCA CGTATGAGGG CGATTACGGA
CTGTCGCCAT ACATCGGCTA TTCGACCTCG TTCAATCCGG TCATCGGCGT GAAGATGTTC
GGTGGCGGAT TGCCCGAGCC GACGCGCGGC ACACAGATCG AGGCCGGCCT GCGCTGGCAG
CCGCCCGGCA AGAACCTGAT GTTGAGCGCA GCCGCCTATC AGATCAACCA GACGAACGTC
GTAACACCGG CGCCGACGAA TCTCGATCCC ACGGGAACGT CTTCCGTGCA GACGGGAGAG
GTGCGTTCAC GCGGCATTGA ACTGAGCGCG GTCGGAAACG TGACGCGCGA GTTGTCCATA
ATTGCGTCGT ACATCTATCA GGACGTGAAA AACGTAAAGG CAAACGACGC GTCGCTGAAC
AACTGGCCGG TCGACATTCC CCGCCCTCGC CAGATGGCGT CGCTGTGGAC CGACTGGACA
TGGCATACAG GAGCGCTCGC GGGCTTCGGG ATCGGCGGTG GGATTCGCTA CCAGAGCGCG
TCCGCGGGGG CGCCGGACAA CTCGCTGACG GTCGCAAGCT ATACGTTGTA CGACGCGGCA
CTCCACTATC AGATGCGTGA CTGGCGTTTC ATGCTGAACG CGGCGAACCT GTTCGACCGC
CACTACATCA GCGGCTGCCA ATCGTACTCG GTCTGCGCAT TCGGCAATGG GCGAACGCTG
CTAGCCAACG CAAAGTACAG CTGGCAGTAA
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| Protein sequence | MVWTTAARQR AITVTVNGMF CAATAGHAYA QVAQSANDNV KPEVTLSEIK VQDAANAASV
GLVGKRTATG TKTDTPITEV PQTINVVTEQ QIEMTGATDL NQALRYVPGF ASFGSDSRTD
LYAVLRGFTP TLFIDGLQAP NTTPIASWRV DPYMIDSITV LRGPTSVLYG AGDPGAIVDV
QTRRADGERV READVQFGNS ARKQIMFDIG DRLDADGKYA YRFVGDARDG NAVTGPNADR
RVALAPSFRW RPDSGTSLTL TATYLQDWND ISHNFLPAQG TVVPNPNGQL SHDVYTGDPT
FNDYRKKQWS LGYQFSHDLD TIWTLTQNLR WMHLSLSDAS VFGGGLAQGS TTDITRYAGL
FQPNYSRFDI DNNAQARFGT GQLEHIVLLG FQYNRQTTIN SVWLALAPEL NIYNPVYTPV
TSAIFSSPAS LGHQDQYTTM NTFGVYAQEQ LKWNRWTLTF GGREDWVDTH LDDHEASTQT
KQDVSAFSGR VGLTYEGDYG LSPYIGYSTS FNPVIGVKMF GGGLPEPTRG TQIEAGLRWQ
PPGKNLMLSA AAYQINQTNV VTPAPTNLDP TGTSSVQTGE VRSRGIELSA VGNVTRELSI
IASYIYQDVK NVKANDASLN NWPVDIPRPR QMASLWTDWT WHTGALAGFG IGGGIRYQSA
SAGAPDNSLT VASYTLYDAA LHYQMRDWRF MLNAANLFDR HYISGCQSYS VCAFGNGRTL
LANAKYSWQ
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