Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2394 |
Symbol | |
ID | 6282668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2687637 |
End bp | 2688359 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642621949 |
Product | OmpA/MotB domain protein |
Protein accession | YP_001896015 |
Protein GI | 187924373 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.25476 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAGC TTTCTGGATG GAGTTTGTCA CTGAGCCTGG TTCTTCTTGC AGGATGTTCG AGTGCTTCCG GGCCGACGTT TAACGCCTAT ACGGTCACGG CCGCGGATGG CTCGCGGCTT CATCAGGTCG AATGTCATGG GATATTCGAA GGACCGGCTA CCTGTATGAC AGTGGCCCAG CGGATATGTC ACGGAGAGCC CGTTCACCCT GTGCAGAAAG TCGGACGCCT CCTGCCGGAC AATGACCAGG CCGATGTCAC GCGGCGGCTC ACGTTCGCGT GTGGTGACGC GCCGGATACT CCGGCTTCAG CGGCCTCGCA GCAGGCCGCA CCTGTGGCGC AAACGGTCGA TGAGTTCGTG CTGCAAAGCG ATGCCCTGTT TGCTTTCGGG CAGTCAAGCC GCGCTTCGAT CTTACCGGGC GGAGCGGCCG CTCTTGACCA GGTCATTGCG CGTATCAGGC AGAGTCGCGG CGTTCAGTCC GTTTCGGTCG TAGGTCACAC CGACCGTCTT GGGCCTGAAA CGGTCAACTA CCCGCTGTCC CTCGCGCGTG CCCAGACAGT GAGGGAGTAC ATGATTGATC ATGGACTGGA CGGTGAGTTG ATACACGCAA CGGGCGTGGG CTCCCACAAT GCAACGACGC AATGTCCGGA CGGCGGCGGC AAGTCGCTCA TCGCTTGCTT GCAACCGGAC AGGCGGGTTT CCGTTGAAGT TCGTGCAGAG TGA
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Protein sequence | MKQLSGWSLS LSLVLLAGCS SASGPTFNAY TVTAADGSRL HQVECHGIFE GPATCMTVAQ RICHGEPVHP VQKVGRLLPD NDQADVTRRL TFACGDAPDT PASAASQQAA PVAQTVDEFV LQSDALFAFG QSSRASILPG GAAALDQVIA RIRQSRGVQS VSVVGHTDRL GPETVNYPLS LARAQTVREY MIDHGLDGEL IHATGVGSHN ATTQCPDGGG KSLIACLQPD RRVSVEVRAE
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