| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2393 |
|---|
| Symbol | |
|---|
| ID | 6282667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2686636 |
|---|
| End bp | 2687550 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642621948 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001896014 |
|---|
| Protein GI | 187924372 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.340015 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGCA TGGCGACGAT GGAGACTTTC GTGACGGTGG TCGATGCGGG TTCATTCTCT
GCCGCCGCCC GTCGCCTGAA GCTAGGTCAG CCAGCTGTCT CAAAGGCGGT CGCCCAACTG
GAGGAGCGTC TGGGCGCCCG TTTGCTACTA CGATCGACAC GCGGTCTGGC GCCGACGGCT
GCCGGGCAGC GGTTTTATGA GCACGCACTC AGAGCCATCC ATGAGGCAGA TCAAGCTGAA
CAGGCTGTGC GCGAGTCGTC CGATGGCTTG TCGGGGCAAC TGCGCGTAGG CGCGGCCGTC
ACCTTCGCCC GACTGCACGT TTTGCCGGCG CTAAAGCCTT TCCTCGATCA ACACCCCAAT
CTGAGCATCG ACATCGTGCT CGACGACCGG TCCGTCGATT TGCTCGAAGA GGGCGTCGAT
GTCGCATTGC GTATGGGCAC GCTGGACGAC TCGAGCATGA CCGCGCGTCG CATCGCGAAC
GGACGGCGAC TCGTGGTCGG CACGCCATCA TATTTCGCGG AAGCCGGACT TCCGCAAACA
CCGCTCGACC TCAGCCGGCA TCAGGCGGTT GTCTATTCCT TGCGAGGCGG CGGCGAATCG
TGGTTGTTCA GCCGCGATGA CGGTTCGGAT TCAACCGTGA CGTTGTCCGG CCGAATCAGC
GTGAACGCAG CTGAAGGCAT GCGCACGGCA GTGCTCGCTC ACATGGGCCT TGCTGTCGCA
TCGGAGTGGA TGTTCGCACC TGAACTCGCG AACGGCACGG TGCAGGCCGT CCTGACGGAC
TGGTCCTTGC CGACCATCGA TGTGTGGGCA GTTTTTCCCG CCGGGCGTAT GGCGACAACG
AAAGCGCGTG CTTTCGTCGC ATTCGTCGAG CACGTTCTCA ATGAGCACAC ATCCAGCGAC
AAGCCGATCG CCTAG
|
|---|
| Protein sequence | MDRMATMETF VTVVDAGSFS AAARRLKLGQ PAVSKAVAQL EERLGARLLL RSTRGLAPTA
AGQRFYEHAL RAIHEADQAE QAVRESSDGL SGQLRVGAAV TFARLHVLPA LKPFLDQHPN
LSIDIVLDDR SVDLLEEGVD VALRMGTLDD SSMTARRIAN GRRLVVGTPS YFAEAGLPQT
PLDLSRHQAV VYSLRGGGES WLFSRDDGSD STVTLSGRIS VNAAEGMRTA VLAHMGLAVA
SEWMFAPELA NGTVQAVLTD WSLPTIDVWA VFPAGRMATT KARAFVAFVE HVLNEHTSSD
KPIA
|
|---|
| |