| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2392 |
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| Symbol | |
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| ID | 6284209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2685663 |
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| End bp | 2686430 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642621947 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001896013 |
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| Protein GI | 187924371 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.432373 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTCAAG CTCTGAAAGG CAAACTCGCC CTCGTTACCG GCGCTTCGCG CGGAATCGGT
GCGGCCATCG CGGCACGTCT TGCGCGCGAT GGTGCATCCG TCATCGTTCA CTATGCGTCG
AGCACGGAGC GCGCCGAAGC AGTCGTCAAA GAGATCCGCG ATGCCGGCGG CGAGGCGGAA
ACCGTGGGCG CCAACCTGTC GAAACCGGAA GGCGTCAGAA GCCTCATCGA TTCGCTGAGC
GGCGCGTTCG GTGGCCGTTT CGAAGGGCGG CTCGACATCC TTGTCAACAA CGCGGGCACG
GTCGAATACG GACCATTTCT CGATTCTTCG GAGAGTTCAT ACGACACGCA CTTCAACCTG
AACGTTCGTG CGCCGATCAA GCTGGCAAAA GACGCGGCGG CGCGTATGGT CGCGGCGGGC
TGGGGGCGCA TCATCAACGT CGGCTCGGCC TTTGGCGAAG CCGCGCCCCT GCCTGGCGTG
ACGCTCTACA TCGCGTCGAA GTTCGCTCTC AGAGGCTTCA CCCGCGGGCT CTCGCGTGAA
CTCGGCAAAT ACGGCGTGAC CGTGAATGCT GTTCAGCCTG GCCCGATCGA TACAGAACTT
GCTCCGCAGC CCGGCACGGA AGATTACGCG ACGATGGCAA AGCTCGCGAG CGTCGGCCGT
TTCGGTAAAC CGGCGGAAAT CGCTGCAGCC GTTGCCTATC TCGCCAGCCC CGAAGCAGGC
TACACGACCG GCGAAAGCCT GACGGTCGAC GGTGGATGGA TTGCCTGA
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| Protein sequence | MTQALKGKLA LVTGASRGIG AAIAARLARD GASVIVHYAS STERAEAVVK EIRDAGGEAE
TVGANLSKPE GVRSLIDSLS GAFGGRFEGR LDILVNNAGT VEYGPFLDSS ESSYDTHFNL
NVRAPIKLAK DAAARMVAAG WGRIINVGSA FGEAAPLPGV TLYIASKFAL RGFTRGLSRE
LGKYGVTVNA VQPGPIDTEL APQPGTEDYA TMAKLASVGR FGKPAEIAAA VAYLASPEAG
YTTGESLTVD GGWIA
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