| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2386 |
|---|
| Symbol | |
|---|
| ID | 6284203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 2678838 |
|---|
| End bp | 2679863 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642621941 |
|---|
| Product | Alcohol dehydrogenase zinc-binding domain protein |
|---|
| Protein accession | YP_001896007 |
|---|
| Protein GI | 187924365 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2130] Putative NADP-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.625543 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCAC CCTATTCGAA TCGTCAATGG TTCTACGTAA AACGTCCCAC GAGTCGCGTT
GGATCGGAAC ACTACGAGCT TCGTGAAAGC GAAATCTCAG GACCGTTGGC GGCGAACGAA
GTGGTTGTCC GCGCGCGGTA TATCAGCGTG GACCCGTACA TTCGCATCCA GCAGCACGAG
CGCAATACGT ATGACGTACC GCATCCCCTC GGCATCGTGC AACGCTCCGG TGTCGTAGGT
GAAGTAGTCG AGTCGGCCAG CCCGCTGTTC GCCAAAGGCG ACTGGGTGTC GGCTTATTCG
GGTTGGCAGT TATATGCACG GTGCCATCAG AGCGAACTGA CCAAACTCGA TCCGGCAAGC
GCGCCGGTTT CCACGGCACT CGGTGTGCTC GGCATGCCAG GGCGTATCGC GTGGTTCGGC
CTCATGGAAG CCGGCCGGCC GCGCCCTGGC GATACCCTGG TCGTTTCCGG CGCGGCCGGG
GCCGTCGGCT CGCTGGTTGC ACAGTTCGGG AAAAAGGCGG GCTGCAAGGT CGTGGGCATT
GCCGGTGGTC CAGACAAGTG CCGATTCCTG CTCGACGAAC TGAAACTGGA TCGCGCGGTC
GATTATCGGG AACACAAGAC GCACAAAGAC TTGACGAGCA CACTGATCGA GGCCACCGGA
GGGGTGGACG TTTATTTCGA CAACGTCGGC GGCCCGATCA CAGATGCCGT GATCCCGCTT
ATCAAGCGCC GGGCCCGCAT CGTGATTTGC GGAGCAATCA GTCAATACGA CGGTGGTTTG
GACACGCCGG ACATGGGCCC GCGATTTTTA CAGCACATGC TCTTTCAACG CGCCACCATC
CAGGGCGTGC TGGCCAGAGA CTACATCAAT CGTATGGACG AAATGGTGGC GCAAGTGGCG
CCTTGGGTTA AGAGCGGTGA GATTGTATTC AAGGAGACTT TCGTCGACGG GTTCGAACAA
CTGCCTGCCG CGCTGAATAG CCTGTTCGAA GGCGGCAACA TCGGCAAGTT GCTCGTGAGG
GTTTGA
|
|---|
| Protein sequence | MNAPYSNRQW FYVKRPTSRV GSEHYELRES EISGPLAANE VVVRARYISV DPYIRIQQHE
RNTYDVPHPL GIVQRSGVVG EVVESASPLF AKGDWVSAYS GWQLYARCHQ SELTKLDPAS
APVSTALGVL GMPGRIAWFG LMEAGRPRPG DTLVVSGAAG AVGSLVAQFG KKAGCKVVGI
AGGPDKCRFL LDELKLDRAV DYREHKTHKD LTSTLIEATG GVDVYFDNVG GPITDAVIPL
IKRRARIVIC GAISQYDGGL DTPDMGPRFL QHMLFQRATI QGVLARDYIN RMDEMVAQVA
PWVKSGEIVF KETFVDGFEQ LPAALNSLFE GGNIGKLLVR V
|
|---|
| |