Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2366 |
Symbol | |
ID | 6282630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2659834 |
End bp | 2660511 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642621922 |
Product | protein of unknown function DUF1028 |
Protein accession | YP_001895988 |
Protein GI | 187924346 |
COG category | [S] Function unknown |
COG ID | [COG3342] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.425356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTTT CAATCGTCGG ACGTTGCCCC GAAACCGGGC AGCTTGGAAT CGCGATCAGT TCGTCCAGCA TCGCGGTGGG CGCCCGGTGC CCATGGGTGC GCGCAGGCGT GGGGGCGGTA GCGACGCAAA ACGTCACGCT GCCCGCGCTA GGGCCGCGGA TTCTCGATCT GCTGGAGCAT GAGCAGATCG ATCCCGCCGC GGCATTGGAC CGTGTGCTCG GCGCGAGCGA GTGGAGCGAG TACCGCCAGG TCACCGTGAT CGATGCGCAA GGCCGTACGG CGTTCTTTAG CGGCAAGGAA GCGCTCGGCA CGTATCACGC CGTCGCCGGC AAGCAGTGTG TGGCGGCAGG GAACATGCTC GCGGGCGTCG AAGTGATCGA AGCCATGCTT CCGGCGTTCG AGCAGGCAAG CGGCACGCTT GCCGATCGAC TGCTCGCGGG CATGCATGCC GCGATTGCCG CGGGCGGCGA AGCAGGGCCC GTGCATTCGG TGGCGCTCAA GATCGTGGGC GACGTGAGCT GGCCGATCGT CGATTTGCGG GTCGATTGGG CGGATCACGA CCCCATCGGC CAGCTCGACG GCCTGTGGCA AGCGTACCGG CCGCAGATGC GGGACTACCT GACCCGGGCG TCGAATCCGA CCGCCGCGCC GAGCTACGGA GTGCCCGGCA ATGAATGA
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Protein sequence | MTFSIVGRCP ETGQLGIAIS SSSIAVGARC PWVRAGVGAV ATQNVTLPAL GPRILDLLEH EQIDPAAALD RVLGASEWSE YRQVTVIDAQ GRTAFFSGKE ALGTYHAVAG KQCVAAGNML AGVEVIEAML PAFEQASGTL ADRLLAGMHA AIAAGGEAGP VHSVALKIVG DVSWPIVDLR VDWADHDPIG QLDGLWQAYR PQMRDYLTRA SNPTAAPSYG VPGNE
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