Gene Bphyt_2348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2348 
Symbol 
ID6281333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2643957 
End bp2644883 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content60% 
IMG OID642621905 
Productprotein of unknown function DUF72 
Protein accessionYP_001895971 
Protein GI187924329 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.104689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTCGC GCGACATACC CATGAAACAG ATCGGCGACC TACGTATCGG TATTTCCGGT 
TGGCGCTACA AAGGATGGAG AGATAGCTTC TATCCCCGCG GGCTGAAACA GGCCGCCGAA
TTGCAGTACG CGTCGTCGCT GTTCCAGAGC ATCGAAATCA ATGGTACGCA TTACAGCCTT
CAGTCGCTCG ACAGCTGGCG GCATTGGTAT GCCGAAACGC CTGCCGACTT CATCTTCAGC
GTGAAGGGCG CGCGGTATCT GACGCATCTC CTGCGTTTTC GCGACGACAG CGCGCAAGTC
GCCAGCGCCA ACTTTTTCGC GCAGGGCCTG CTCGCCCTGA ATGAAAAGCT AGGGCCTATT
CTGTGGCAGT TCCCGCCTTC GTTCCGCTTT GAACCGGCGG CCATGGAACG CTTTTTACGT
TTCCTGCCTC GCGACACCGC GGCTGCGCTC TCTCTCGCGG AGCAACACGA TGCGCGAGTC
AAGACGCCTT ACCTCGAAAT GGACCGCAAG CGCAGACTGC GCCATGCCGT CGAGATACGC
CACCCCAGTT TTATGGACCC TGTCTTCATC GAGTTGCTCA GACAGTACGA CACCGCGCTG
GTTGTTTCCG ACTCGACCGA ATCGTGGCCG CTGGCGGAAG ACGTGACCGC TGACTTCGTT
TACATCCGCT TGCACGGCAC CGAATCGCGG TATTCCGGCG CCTACGCGGA CGAAGCGCTT
GACGACTGGG CCGCCCGGAT CGACGCATGG CGCCGCGGTT CGCAGCCGGC GGATGCGCGG
CTAATCGCGC CGCATCTTCA TCCACCGGCT CGGACGCGGC GGGACGTGTA CTGCTATTTC
GACAACGACG CCAAAACACA TGCGCCCTTC GACGCGCAGC GGTTGATTGA ACGGCTCGGC
TTACAAGCAG TGCATTCGGC GGCGTAA
 
Protein sequence
MHSRDIPMKQ IGDLRIGISG WRYKGWRDSF YPRGLKQAAE LQYASSLFQS IEINGTHYSL 
QSLDSWRHWY AETPADFIFS VKGARYLTHL LRFRDDSAQV ASANFFAQGL LALNEKLGPI
LWQFPPSFRF EPAAMERFLR FLPRDTAAAL SLAEQHDARV KTPYLEMDRK RRLRHAVEIR
HPSFMDPVFI ELLRQYDTAL VVSDSTESWP LAEDVTADFV YIRLHGTESR YSGAYADEAL
DDWAARIDAW RRGSQPADAR LIAPHLHPPA RTRRDVYCYF DNDAKTHAPF DAQRLIERLG
LQAVHSAA