Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2345 |
Symbol | |
ID | 6280869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2641686 |
End bp | 2642567 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642621902 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_001895968 |
Protein GI | 187924326 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGACG ACGTACTTGC CTTTAACGGG CTGCGCCCGC GATTGCAGAA AATCGCGTAT CGAATGCTGG GGTCCGTTGC CGAGGCCGAA GATATCGTGC AGGACGTCTG GCTGCGTTGG CATGCAACAG CCCGCGAAGC CATCGACAAC GCGGAGGCGT GGCTGGTCGC GGTCACGACG CGAATGTCCA TCGACCGTCT GCGCGCGGCC AAGATTCAAC GCGAACACTA CGCGGGCATC TGGTTGCCCG AACCCGAGAT GACCGAATTC CCGGCTACGC CGGAGGAGGC CACGGAGCGC GCCGACGACG TCTCCGTGGC TTTTCTGGTG CTGCTCGAGC GGCTTACGCC TGATGCCCGG GCGGCGTTCC TGCTGCGCGA GGTATTCGAC GCCGACTATG ACGAAGTCGC ACGAGCCATC GGCAAGACGG AGGCGGCGTG CCGTCAGCTG GTCAGCCGCG CAAAAGCGCA GTTGCGCGAC GATCGTCCGC GCTCCGAGGT GCCGCGCGAA ACGCATCTGC GCCTGCTGCG AACATTCGTG CAGGCGCTGC AGCGCGGCGA CTTTCACGCG ATCAACGCAT TGCTGGCCGA AGACGCAAAG CTGATCGGCG ACGGCGGCGG CAAAGTCCAG AGCTTCCCGG AGCCGATGGC GGGCGGCCAG CGCATCGCAC AACTGTTCTA CGCGTCGCAC CGGCGTTATG GCGACGAACT GAGCGTCAAG CTCGTAATGC TCAACGGCCA ATGGGCGCTG CTGCGGTTTA TCGAGGGCGA ACTCGAATCG GCACAGTCGT TCGAAACGGA CGGCGAGCGT ATCGTCCGTA TTCATGTGCA GCGCAACCCT GACAAGCTCG CGCGCATCGC GGCGGCACAC GCCAACGGCT GA
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Protein sequence | MDDDVLAFNG LRPRLQKIAY RMLGSVAEAE DIVQDVWLRW HATAREAIDN AEAWLVAVTT RMSIDRLRAA KIQREHYAGI WLPEPEMTEF PATPEEATER ADDVSVAFLV LLERLTPDAR AAFLLREVFD ADYDEVARAI GKTEAACRQL VSRAKAQLRD DRPRSEVPRE THLRLLRTFV QALQRGDFHA INALLAEDAK LIGDGGGKVQ SFPEPMAGGQ RIAQLFYASH RRYGDELSVK LVMLNGQWAL LRFIEGELES AQSFETDGER IVRIHVQRNP DKLARIAAAH ANG
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