Gene Bphyt_2343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2343 
Symbol 
ID6280867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2640533 
End bp2640952 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content62% 
IMG OID642621900 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_001895966 
Protein GI187924324 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGTT TGGGAAATAC GGCTCTGGCC GCGCTCGTCG CCGTGAGCGC GTCGTTGAGC 
ACGTCGCTGA GCGTGGCCCG TGCCGAGGCG CCCGCCGCCA TCGTCACGCC GTTGATGACG
CAGCCTCTTG ACGACTATCC GGGCAAGGAA GCCCTGATGA TCACCGTCGA GTATCCGCCG
GGCGCGGTCG ACCCCGTCCA TCGGCATCAT GCGCACGGGT TTATCTATGT GCTGGAAGGA
TCGATCGTGA TGCAGGTCAA GGGCGGCAAG GAAGTCACGT TGACACCCGG ACAGACCTTC
TACGAAGGTC CAAACGATGT CCACACGGTC GGACGCAACG CGAGCCAGAC AAAGCCGGCC
AGGTTTCTCG TGCTACTGCT GAAGGATAAG GGCGCGCCGG TTCTCGTACC GGAGAAATAG
 
Protein sequence
MLRLGNTALA ALVAVSASLS TSLSVARAEA PAAIVTPLMT QPLDDYPGKE ALMITVEYPP 
GAVDPVHRHH AHGFIYVLEG SIVMQVKGGK EVTLTPGQTF YEGPNDVHTV GRNASQTKPA
RFLVLLLKDK GAPVLVPEK