| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2340 |
|---|
| Symbol | |
|---|
| ID | 6284778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2637846 |
|---|
| End bp | 2638361 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642621897 |
|---|
| Product | OsmC family protein |
|---|
| Protein accession | YP_001895963 |
|---|
| Protein GI | 187924321 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1764] Predicted redox protein, regulator of disulfide bond formation |
|---|
| TIGRFAM ID | [TIGR03561] peroxiredoxin, Ohr subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.785611 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCT TGCGTCCACC GCCGCTGACA CTGCTCGACA AGTATCACGG GCGAGACCCC
CAAACGCTGT ATTCGACCAC CGTCACCGTA ACAGGCGGCG ACGCGGGTCA CGGTCGAGCG
TCGGGCATCG CCCGTTCCGA CGACGGCAAT CTCGTCGTCC ACTTGCGATT GCCGCAGGCG
CTGGATGGGC CCGGCGACGG CACCAATCCG GAGCAGCTAT TCGCGGCCGG TTACGCAGCC
TGCTTTCATG GCGCGCTGAG TCTGCTTGCG GCACGAGCGA GCATTCCGAT TCCCGGTGCC
TCGGTGCAAG TCACCGTCGA TTTTGGCCGC GACCCGGTGG ACGGTCTGTT CATCCTGACC
GCGGAGACCC GTATCCGCCT GCCCGGTGTC GAACGGGGCG TGGCCGAGGA ACTGGTTCGC
AACACCGAAC GGTTTTGCCC TTACACGAAG ATGGCGCGGC AGGGAATCGG GAATGTCGTT
GCGCTGGTGC AGCAGGACGA CGCTGGGCAT TCGTAG
|
|---|
| Protein sequence | MTRLRPPPLT LLDKYHGRDP QTLYSTTVTV TGGDAGHGRA SGIARSDDGN LVVHLRLPQA
LDGPGDGTNP EQLFAAGYAA CFHGALSLLA ARASIPIPGA SVQVTVDFGR DPVDGLFILT
AETRIRLPGV ERGVAEELVR NTERFCPYTK MARQGIGNVV ALVQQDDAGH S
|
|---|
| |