Gene Bphyt_2334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2334 
Symbol 
ID6284772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2632323 
End bp2632838 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content68% 
IMG OID642621891 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_001895957 
Protein GI187924315 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.55905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTCG CGCAAGCCGC CGCCGAAGAA GCGCGCGCCG CCGGCGAAGT GCCCGTTGGC 
GCAGTGCTCG TGCGCGGTGA AGAAGTCATT GCGACCGGTT TCAATCATCC GATCGGCGGG
CACGACCCAT CGGCGCATGC GGAAATGGCC GCGTTGCGCG CCGCGGCGCA AGCCGTCGAG
AACTACCGTT TGCCGGGCTG CGAACTTTAT GTGACGCTCG AGCCGTGCCT GATGTGCGCC
GGCGCGATCA TGCATGCGCG CATCGCGCGA GTCGTGTTCG GGGCGCGCGA TCCGAAAACC
GGCGCGTGCG GCAGTGTGGT CGACGCCTTC GCGAATCCGC AGTTGAATCA TCACACCACG
GTGATCGGCG GCGTGCTCGA AAACGAATGT GGCGCCGCGC TCAAATCGTT CTTTGCCGAG
CGGCGCCGCG CGAGCCGCGA AGCACGCGCG GCAGCACGTG CCGACGTAGC CGGCGCACCG
GGCAGCATCG AACCGGGCCC AGCCGAGTCG CTCTAA
 
Protein sequence
MALAQAAAEE ARAAGEVPVG AVLVRGEEVI ATGFNHPIGG HDPSAHAEMA ALRAAAQAVE 
NYRLPGCELY VTLEPCLMCA GAIMHARIAR VVFGARDPKT GACGSVVDAF ANPQLNHHTT
VIGGVLENEC GAALKSFFAE RRRASREARA AARADVAGAP GSIEPGPAES L