| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2333 |
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| Symbol | ldcA |
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| ID | 6283444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2631368 |
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| End bp | 2632294 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642621890 |
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| Product | L,D-carboxypeptidase A |
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| Protein accession | YP_001895956 |
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| Protein GI | 187924314 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.602476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCC ATCGCACCAT CCAACTGATC GCGCCGTCCG GGTATCCGCA TGACCCGGAG
GTGCTGCATC GCGCGTTGCA GCGCTTCCAT ACGCAGGGGC ATCGCGTCGA GGGCGTGGAA
ACGACGAAGC GTCGCTACCA GCGCTTCGCC GGCACCGATG GCGAGCGCGC GGCCGATCTG
AACCGGCTCG CCGATCCGTC GCGTAAGTTG CCGGACATCG TGCTGGCCGT GCGCGGCGGT
TACGGCGCAG TGCGCATCCT GCACGGACTC GACTACGATG GGTTGCAACG GCGGCTGACC
GATCAGCCAA TCGCGCTGGT CGGACACAGC GATTTCACCG CGATCCAGCT TGCGCTGCTG
GCACGCGCCG GCGTGAAGAC TTTCGGCGGC CCGATGGTGA TGAGCGACTT CGGCGCGGAA
GAACTGAGCG AATTCACCAT GCAACACTTC TGGTCGGCGG TGACGAAGCC GACCATGACG
ATCTCGAACA ACACGCCGCA AGCGCAGCCG GTCGACGTCT CCGGCATGTT GTGGGGCGGC
AATCTGGCGG TGCTGACGTC GCTGATCGGC ACGCCGTACA TGCCGCCGGT GCAGGGCGGC
ATCCTGTTCC TCGAGGACGT GAACGAGCAA GCGTTCCGGG TCGAGCGGAT GATCTATCAG
TTGCACCTGT CCGGCATTCT TGCGCAGCAA CAGGCGCTCG TGCTGGGCGA TTTCTCCGGC
GCCAAACCCT ATGAATACGA CAACGGCTAC GACCTGCACA CAATGATCGA GCAGGTCAGG
TCGGTGATCG GTATTCCCGT CGTCAGCGGG CTGCAATTCG GGCATGTCCG CAACATGCTG
ACGCTGCCGG TGGGCGCTGA CGCGCATCTC GTCGCGGACG CACGTGGGTT CAAACTAAGC
TTGTCGGGCT ATCCATACCT CGCCTGA
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| Protein sequence | MTVHRTIQLI APSGYPHDPE VLHRALQRFH TQGHRVEGVE TTKRRYQRFA GTDGERAADL
NRLADPSRKL PDIVLAVRGG YGAVRILHGL DYDGLQRRLT DQPIALVGHS DFTAIQLALL
ARAGVKTFGG PMVMSDFGAE ELSEFTMQHF WSAVTKPTMT ISNNTPQAQP VDVSGMLWGG
NLAVLTSLIG TPYMPPVQGG ILFLEDVNEQ AFRVERMIYQ LHLSGILAQQ QALVLGDFSG
AKPYEYDNGY DLHTMIEQVR SVIGIPVVSG LQFGHVRNML TLPVGADAHL VADARGFKLS
LSGYPYLA
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