Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2325 |
Symbol | |
ID | 6281244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2622669 |
End bp | 2623862 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642621882 |
Product | protein of unknown function DUF989 |
Protein accession | YP_001895948 |
Protein GI | 187924306 |
COG category | [S] Function unknown |
COG ID | [COG3748] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.547716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.41049 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGGCT TTATCACAGA CTGGTTGAAT CTGGCGATTC GCTGGTTTCA CGTCATCGCC GCGATTGCAT GGATCGGCGA ATCGTTTTAT TTCGTCGCGC TCGACAACAG CCTCAAACCG CCAACGGACC CGAACCAGCG CCGGCGCGGC GTGTTCGGCG AACTGTGGCA CGTGCACGGC GGCGGCTTCT ACAACATGCA GAAGTACACC GTCGCGCCGC CGGAAATGCC GGACGATCTG CACTGGTCGA AGTGGCCGTC GTACACCACC TGGCTGTCGG GCTTCGGTCT CTTTACCGTG CTGTATCTGT TTTCGCCGAG CACTTACCTG ATCGACAAGA ACGTGCTGGA TATGGGACCG GTGGTCGCCG TCGCCTCGGC GCTCGGCTTC CTCGCAGCCG GCTGGATCGT GTACGACTCG CTGTGCCGCA TTCTCGGCAA CAAGGACAAG GTGCTCGGCA TCTGCGTCGG CGTGTATGTG CTGATCGCGG CGTGGCTCGC ATGCCATATC TTCGCGGGCC GCGCGGCTTA CCTGATCATG GGCGCGATGC TGGCAACGAT CATGTCGGCC AACGTGTTCT TCGTGATCAT TCCGGGCCAG CGCAAGATGG TCGACGCGAT GCTCAAGGGC GAGACGCCGA ACCCGATCTA CGGCAAGCGC GGCAAGCAGC GCTCGGTGCA CAACACGTAT TTCACGCTGC CGGTGGTGTT CGCGATGCTG TCGAACCACT ACGCGATGAC CTATACGCAT CCGTACAACT GGGCCGTGTT GCTGGTCATC ATGCTGGCCG GCGCGCTGAT CCGTCAGTTC TTCGTGATGC GTCACCGTGG CCAGGTGTTG TGGTATCTGC CGCTGGTCGG CATCGCGCTG ATGTTCGGCG CCCTCTTCTG GACGATGCCG AAGCCCGTCG TGCCGCAAGC ACAAGCTGCG AACGCGCCGG TGGTCCGTGT GGCCGATATC GCGCCGGTGC TGCAACAGCG CTGCGTGGCG TGCCACTCCG CGCATCCGAC GATGATGGGT AGCGCCCCGG CCGGCGTGCT GTTGGATACG CCGGATGAGA TCTCGCAGAA CGCACAGCGG ATCTATCAGC AAGCCGTGAC GTTGAAGGCC ATGCCGCTCG GTAACGTGAC GCACATGACG GACGACGAGC GGATGAAGAT CGCAGCGTGG TTCCAAGGTG GCGCAGTGAA GTAA
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Protein sequence | MEGFITDWLN LAIRWFHVIA AIAWIGESFY FVALDNSLKP PTDPNQRRRG VFGELWHVHG GGFYNMQKYT VAPPEMPDDL HWSKWPSYTT WLSGFGLFTV LYLFSPSTYL IDKNVLDMGP VVAVASALGF LAAGWIVYDS LCRILGNKDK VLGICVGVYV LIAAWLACHI FAGRAAYLIM GAMLATIMSA NVFFVIIPGQ RKMVDAMLKG ETPNPIYGKR GKQRSVHNTY FTLPVVFAML SNHYAMTYTH PYNWAVLLVI MLAGALIRQF FVMRHRGQVL WYLPLVGIAL MFGALFWTMP KPVVPQAQAA NAPVVRVADI APVLQQRCVA CHSAHPTMMG SAPAGVLLDT PDEISQNAQR IYQQAVTLKA MPLGNVTHMT DDERMKIAAW FQGGAVK
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