Gene Bphyt_2325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2325 
Symbol 
ID6281244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2622669 
End bp2623862 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content62% 
IMG OID642621882 
Productprotein of unknown function DUF989 
Protein accessionYP_001895948 
Protein GI187924306 
COG category[S] Function unknown 
COG ID[COG3748] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.547716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.41049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGCT TTATCACAGA CTGGTTGAAT CTGGCGATTC GCTGGTTTCA CGTCATCGCC 
GCGATTGCAT GGATCGGCGA ATCGTTTTAT TTCGTCGCGC TCGACAACAG CCTCAAACCG
CCAACGGACC CGAACCAGCG CCGGCGCGGC GTGTTCGGCG AACTGTGGCA CGTGCACGGC
GGCGGCTTCT ACAACATGCA GAAGTACACC GTCGCGCCGC CGGAAATGCC GGACGATCTG
CACTGGTCGA AGTGGCCGTC GTACACCACC TGGCTGTCGG GCTTCGGTCT CTTTACCGTG
CTGTATCTGT TTTCGCCGAG CACTTACCTG ATCGACAAGA ACGTGCTGGA TATGGGACCG
GTGGTCGCCG TCGCCTCGGC GCTCGGCTTC CTCGCAGCCG GCTGGATCGT GTACGACTCG
CTGTGCCGCA TTCTCGGCAA CAAGGACAAG GTGCTCGGCA TCTGCGTCGG CGTGTATGTG
CTGATCGCGG CGTGGCTCGC ATGCCATATC TTCGCGGGCC GCGCGGCTTA CCTGATCATG
GGCGCGATGC TGGCAACGAT CATGTCGGCC AACGTGTTCT TCGTGATCAT TCCGGGCCAG
CGCAAGATGG TCGACGCGAT GCTCAAGGGC GAGACGCCGA ACCCGATCTA CGGCAAGCGC
GGCAAGCAGC GCTCGGTGCA CAACACGTAT TTCACGCTGC CGGTGGTGTT CGCGATGCTG
TCGAACCACT ACGCGATGAC CTATACGCAT CCGTACAACT GGGCCGTGTT GCTGGTCATC
ATGCTGGCCG GCGCGCTGAT CCGTCAGTTC TTCGTGATGC GTCACCGTGG CCAGGTGTTG
TGGTATCTGC CGCTGGTCGG CATCGCGCTG ATGTTCGGCG CCCTCTTCTG GACGATGCCG
AAGCCCGTCG TGCCGCAAGC ACAAGCTGCG AACGCGCCGG TGGTCCGTGT GGCCGATATC
GCGCCGGTGC TGCAACAGCG CTGCGTGGCG TGCCACTCCG CGCATCCGAC GATGATGGGT
AGCGCCCCGG CCGGCGTGCT GTTGGATACG CCGGATGAGA TCTCGCAGAA CGCACAGCGG
ATCTATCAGC AAGCCGTGAC GTTGAAGGCC ATGCCGCTCG GTAACGTGAC GCACATGACG
GACGACGAGC GGATGAAGAT CGCAGCGTGG TTCCAAGGTG GCGCAGTGAA GTAA
 
Protein sequence
MEGFITDWLN LAIRWFHVIA AIAWIGESFY FVALDNSLKP PTDPNQRRRG VFGELWHVHG 
GGFYNMQKYT VAPPEMPDDL HWSKWPSYTT WLSGFGLFTV LYLFSPSTYL IDKNVLDMGP
VVAVASALGF LAAGWIVYDS LCRILGNKDK VLGICVGVYV LIAAWLACHI FAGRAAYLIM
GAMLATIMSA NVFFVIIPGQ RKMVDAMLKG ETPNPIYGKR GKQRSVHNTY FTLPVVFAML
SNHYAMTYTH PYNWAVLLVI MLAGALIRQF FVMRHRGQVL WYLPLVGIAL MFGALFWTMP
KPVVPQAQAA NAPVVRVADI APVLQQRCVA CHSAHPTMMG SAPAGVLLDT PDEISQNAQR
IYQQAVTLKA MPLGNVTHMT DDERMKIAAW FQGGAVK