| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2323 |
|---|
| Symbol | |
|---|
| ID | 6281242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2620043 |
|---|
| End bp | 2621440 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642621880 |
|---|
| Product | hydroxydechloroatrazine ethylaminohydrolase |
|---|
| Protein accession | YP_001895946 |
|---|
| Protein GI | 187924304 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.421089 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATGG AACAAGCGGC TAATCAAACG AACAAGCCCA AAAAAACGAT GCTGGTGAAG
CACGCGGATG TGCTGGTCAC GATGGACGGC GCCCGGCGCG AACTGCGCGA CGGTGGCCTG
TATATCGAGG ACAACCGCAT CGTCGCGGTC GGACCGACGG CGGATTTACC GCAAACCGCC
GACGAAGTGC TGGACATGCG CGGGCATCTG GTGATCCCGG GCTTGGTGAA CACGCACCAC
CACATGTACC AGAGCCTGAC GCGCGCGATT CCCGCCGCGC AGAACGCCGA ATTGTTCGGC
TGGCTCACGA ACCTCTACAA GGTGTGGGCA AACCTCACGC CGGAGATGAT CGAAGTCTCG
ACGCTGACGG CAATGGCCGA GCTGTTGCTT TCCGGCTGCA CGACGTCGAG CGACCATCTG
TATATCTATC CGAACGGCAG CCGCCTCGAC GACAGCATCG CCGCGGCGCG CCGGATCGGC
ATGCGTTTTC ACGCGGCGCG CGGCAGCATG AGCGTGGGGC AGAAAGACGG TGGCTTGCCG
CCGGATTCGG TGGTCGAGCG TGAAGCGGAC ATTCTGAAGG ACACGCAGCG GCTGATCGAG
ACGTACCACG ACGAGGGGCG TTACGCGATG TTGCGCGTGG TGGTCGCGCC ATGCTCACCG
TTCTCGGTGA GCCGCGATCT GATGCGGGAG TCGGCGGTGA TGGCGCGGCG GTATGGTGTT
TCGATGCACA CGCATCTGGC GGAGAACGTC AACGACATCG CATATAGCCG CGAGAAGTTC
GGCATGACGC CGGCGGAATA CGCGGAAGAC CTTGGCTGGG TCGGTCACGA CGTATGGCAT
GCGCACTGCG TGCAACTCGA CGACGCGGGC ATCGAGCTGT TCGCGCGCAC CGGCACCGGC
GTCGCGCATT GCCCGTGTTC GAACATGCGG CTCGCGTCGG GCATCGCGCC GGTGAAGCGC
ATGCGTTTAG CGGGTGTGCC GGTGGGCTTG GGCGTCGACG GTTCGGCGTC GAATGACGGC
GCGCACATGG TCGCCGAAGT GCGCCAGGCT TTGTTGCTGC AGCGAGTGGG TTTCGGGCCC
GATGCCATGA CCGCGCGCGA GGCATTGGAG ATCGCGACGC TCGGCGGCGC GAAGGTGCTC
AATCGCGACG ACATCGGCGC ATTGGCGCCC GGCATGGCGG CGGATTTCGT GTCGTTCGAT
CTGCGCCAGC CGCTTTTTGC CGGCGCGTTG CATGATCCGG TCGCGGCACT CGTGTTCTGC
GCGCCGTCAC AGGTGAGCTA TAGCGTGATC GGCGGCAAGG TGGTCGTGAA AGAAGGGCAG
TTGACGACGT TGGAACTCGG ACCGGTCATC GAGCAACACA ACCGGTTGGC GAAGACGCTT
TACGAAGCGG CGGCGTAA
|
|---|
| Protein sequence | MTMEQAANQT NKPKKTMLVK HADVLVTMDG ARRELRDGGL YIEDNRIVAV GPTADLPQTA
DEVLDMRGHL VIPGLVNTHH HMYQSLTRAI PAAQNAELFG WLTNLYKVWA NLTPEMIEVS
TLTAMAELLL SGCTTSSDHL YIYPNGSRLD DSIAAARRIG MRFHAARGSM SVGQKDGGLP
PDSVVEREAD ILKDTQRLIE TYHDEGRYAM LRVVVAPCSP FSVSRDLMRE SAVMARRYGV
SMHTHLAENV NDIAYSREKF GMTPAEYAED LGWVGHDVWH AHCVQLDDAG IELFARTGTG
VAHCPCSNMR LASGIAPVKR MRLAGVPVGL GVDGSASNDG AHMVAEVRQA LLLQRVGFGP
DAMTAREALE IATLGGAKVL NRDDIGALAP GMAADFVSFD LRQPLFAGAL HDPVAALVFC
APSQVSYSVI GGKVVVKEGQ LTTLELGPVI EQHNRLAKTL YEAAA
|
|---|
| |