Gene Bphyt_2321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2321 
Symbol 
ID6281240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2617204 
End bp2618805 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content67% 
IMG OID642621878 
ProductABC transporter related 
Protein accessionYP_001895944 
Protein GI187924302 
COG category[R] General function prediction only 
COG ID[COG3845] ABC-type uncharacterized transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.640938 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACT CTTCTTATAG CGACGGCGCC GCCGCGCAGC CGGCAGACAG GCCGGAACAG 
GCGGCGCCCC GGTTGATGCT CCAGAGCATC ACCAAACAAT ACCCGGCCGT GCGAGCCAAC
GACGACGTCA CGTTGATCGT CGCGCCGGGC GAAATCCATG CCGTGCTCGG CGAGAACGGC
GCCGGCAAAA GCACGCTGAT GAAAATCATC TACGGCGCGG TGCGGCCCGA CGCCGGCGAG
ATTCGCTGGG AAGGCCAGAC GGTCGAGATC GCCAACCCGG CGGCGGCGCG CAAACTGGGC
ATCGGCATGG TGTTCCAGCA CTTTTCGCTG TTCGAGACAC TCACTGTCGG CGAAAACATC
GCGCTCGCGC TCGACGAACC TTTCGATCTG AAGACGCTGT CGAGGCGCAT CCGCGAAGTC
TCCGCCGATT ACGGCCTCGA TATCGATCCG CAGCGTCACG TGCACAGCCT GACCGTGGGC
GAGCGGCAGC GCGTCGAGAT CGTGCGCTGT CTGCTGCAGA ACCCGCGTTT GCTGATCATG
GACGAGCCGA CCTCGGTGCT GACACCGCAA GCGGTCCGCA AGCTCTTCGA GACGCTGCGC
CGGCTCGCCG CCGAAGGCTG CAGCATCCTT TACATCAGTC ACAAGCTCGA CGAAATCCAG
GAGTTGTGCG ACACCGCGAC GGTGATGCGC GGCGGCCGCG TGACGGGTCA CGTGAAGCCG
AAGGGCGAAA CACATGCGTC GCTCGCGCAG TTGATGGTCG GTCACTCGCT GCCGGATTAC
ACGCGGCGCG AACACAATCC GGGCGCCGTG CTGCTCGATG TGAAGCGACT CTCGGTGGAA
AGCGACGACC CGTTCGGCAC CTCGTTGCAC GACGTGTCGT TCGGCGTGCA TGCGGGCGAA
ATCTTCGGCA TCGCGGGCGT CTCGGGCAAT GGCCAGGCGG AACTGCTGTC GGCGTTGTCG
GGCGAAAAGC GCGGCGTGCG CGCCGATGCG GTCACGATTT GCGGCAAGGC GGCCGGGCGC
CTCGGCGCGG GCGGGCGGCG CGCGCTCGGC TTCGGCTTCG TGCCGGAAGA GCGTCTCGGG
CGCGGCGCAG TGCCGGCCAT GACGCTGTCG GAAAACGCGC TGCTCACCGC GCATCGTCAG
CAGATGGTGA ATTCGGGCTG GATCAAGGCC GGTGCGATGC GCGCATTCGC GAAGCGCTGC
ATCGACGCCT TCGACGTGCG CTGCGGCGGC TCCGAAGCGC TCGCGCAAAG TCTGTCGGGC
GGCAATCTGC AGAAGTACAT CATGGGCCGC GAGATTCTGC AGGCGCCCAA GGTGCTGGTG
GTCGCGCAGC CCACGTGGGG TGTCGACGTC GGCGCGGCGG CGTTCATTCG CCAGCAGTTG
CTCGATCTGT CGGCGCGCGG CGTGGCGATT CTGGTGATCT CGGAGGAGTT AGAAGAGTTG
TTCGACATCT GCGATCGTAT CGCGGTGCTC GCAGGCGGCA GACTCTCGCC GGTGCGCGGC
ACGGGGGCGA CCAACGCCGA GGAAATCGGC CGCTGGATGG CGGGCCTGTT CGGCGACCGC
GAGGGCTCGG CGCCTTCGGC GGAACAGCCG GCGCATGCCT GA
 
Protein sequence
MSDSSYSDGA AAQPADRPEQ AAPRLMLQSI TKQYPAVRAN DDVTLIVAPG EIHAVLGENG 
AGKSTLMKII YGAVRPDAGE IRWEGQTVEI ANPAAARKLG IGMVFQHFSL FETLTVGENI
ALALDEPFDL KTLSRRIREV SADYGLDIDP QRHVHSLTVG ERQRVEIVRC LLQNPRLLIM
DEPTSVLTPQ AVRKLFETLR RLAAEGCSIL YISHKLDEIQ ELCDTATVMR GGRVTGHVKP
KGETHASLAQ LMVGHSLPDY TRREHNPGAV LLDVKRLSVE SDDPFGTSLH DVSFGVHAGE
IFGIAGVSGN GQAELLSALS GEKRGVRADA VTICGKAAGR LGAGGRRALG FGFVPEERLG
RGAVPAMTLS ENALLTAHRQ QMVNSGWIKA GAMRAFAKRC IDAFDVRCGG SEALAQSLSG
GNLQKYIMGR EILQAPKVLV VAQPTWGVDV GAAAFIRQQL LDLSARGVAI LVISEELEEL
FDICDRIAVL AGGRLSPVRG TGATNAEEIG RWMAGLFGDR EGSAPSAEQP AHA