| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2316 |
|---|
| Symbol | |
|---|
| ID | 6283169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2612309 |
|---|
| End bp | 2613376 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642621873 |
|---|
| Product | 6-phosphogluconate dehydrogenase NAD-binding |
|---|
| Protein accession | YP_001895939 |
|---|
| Protein GI | 187924297 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.16521 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAAATTG GTTTTTGCGG TCCCGGTTTG ATGGGCGCGC CGATGACCCG GCATCTGCTG
CGCGCGGGAC ATACCGTGCA TGTCTGGAAC CGCACGCGAG CGAAGGCGGA AGCGCTGGTG
GCGGACGGCG CTCGAGTGGT CGACACGCCG CGCGAACTCG CCGCGCGGTG TGAGGCCGTG
CTGCTGTGCG TCGCGGATGC AGCGGCGGTA GAGGAAACCG TGTTCGGCGC TTCCGGCCTT
CTTGGTGCCG ATGCGGCCGT GTCGGGCCGG TTGCGCTGGA TCGTCGATCA CTCCAGCATC
CCGCCGGCCG CGACGCGCGC ATTCGCGCAG CGGGTGGCGG CGCGGACGGT GGTTCGCACG
GTTGGGAGTG TGGACGGGGG CGCGGGGATG GGCGAGGACG CAGGCGTGGG CGACGTCGCA
GGTGCAGTAA GGAACGCAGC TGCGGACCCA CGCACAGGCG CTGGCGTGAA CAAGCACGCC
GGCGCGAACC CGAACGCGGT CGACAGTGCG ACCCCCGGCA GCATCGGCTG GATCGACGCG
CCAGTTTCAG GCGGCGTGGC CGGCGCCACC GCCGGCACGC TGGCAGTCAT GGCGGGCGGC
GCCGCGGCGG ATGTCGAGGC CGTCAAGCCG CTGCTTGGCG CTTACGCGTC GCGTGTCACG
CACATGGGCG ACGTCGGCGC GGGCCAGACC GCCAAGCTGT GCAATCAGAC CATCGTCACC
GCGACGCTGG CGGCGATCGC CGAAGCGGTG AGCCTCGCGC AACGCAGCGG CCTCGACGCA
TCGCGGCTGA CCGAAGGTCT GGCCGGCGGC TGGGCCGATT CGGTGCTGCT GCAGACCTTC
GTGCCGCGCA TGACCCAAAC CGGGCTCGCG CCGATCGGCG CGTTCCGGAC CTTTCAGAAG
GACATCGACA CGGTGGCGGC GACCGCGTAC GAGACCGGGA CGCCGATGCC GGTGTCGTCG
ACGGTCCAGC AATTGCTGCG GCTCGGCGCG GCGATGGGGC TCGGCGAGGC CGACCTGTCC
GCCTTCATCG ACGTTTTGCA GACGCCGCGC GGCGTCCCAA GCCGGTAG
|
|---|
| Protein sequence | MEIGFCGPGL MGAPMTRHLL RAGHTVHVWN RTRAKAEALV ADGARVVDTP RELAARCEAV
LLCVADAAAV EETVFGASGL LGADAAVSGR LRWIVDHSSI PPAATRAFAQ RVAARTVVRT
VGSVDGGAGM GEDAGVGDVA GAVRNAAADP RTGAGVNKHA GANPNAVDSA TPGSIGWIDA
PVSGGVAGAT AGTLAVMAGG AAADVEAVKP LLGAYASRVT HMGDVGAGQT AKLCNQTIVT
ATLAAIAEAV SLAQRSGLDA SRLTEGLAGG WADSVLLQTF VPRMTQTGLA PIGAFRTFQK
DIDTVAATAY ETGTPMPVSS TVQQLLRLGA AMGLGEADLS AFIDVLQTPR GVPSR
|
|---|
| |