| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2313 |
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| Symbol | |
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| ID | 6282268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2608440 |
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| End bp | 2609108 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642621870 |
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| Product | OmpW family protein |
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| Protein accession | YP_001895936 |
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| Protein GI | 187924294 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3047] Outer membrane protein W |
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| TIGRFAM ID | [TIGR01168] Gram-positive signal peptide, YSIRK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.742705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.203031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCACG CATCCAGAAA CAGAAAAAGA AACAGAATCG GAACCGCCGC TATCGCAGCA
AGCCTGCTGT TCGCGGGCGC ACTTGCGCCG CAGGCGCATG CAGCGGGAGA CGACGCGATG
AGCGGCATTC ACGCCGGCGA CGTACTGGTG CGATTGCGCG CCATCAGCAT CATGCCGAAC
GTGAGCACGA CCCAATCGCT GAGCGCGCTA AACGTCGGCG TGAATAACGC GATCGTGCCG
GAACTGGATC TGACATACAT GATCCGCGAC AACCTCGGCG TCGAGCTGAT TCTCGGCACC
TCGCGGCATC AAGTGACTTC GAACATCGGC GGGCTCGGCG GCGTGAACGT GTTGCCGCCC
ACGCTGCTGT TGCAATATCA CTTCAATCAC GCGGGCCGTA TTCGTCCGTA TGTCGGCGCG
GGTCTGAACT ACACGCTGTT CTACAACAAC GGTCTGAACG CGGGTGGCCA GTCGATCTCG
ATCACCAATC ACAGTTGGGG ACCGGCGTTA CAGGCCGGCG TCGACGTGCA GGTCACTAAA
TCCTTGTTCG TCAACGCGGA CATCAAGAAG ATCTGGATGC ATACGGATGC CTCGCTCGGC
GGGCAGCCGC TGGGCCGCTT GAGCATCGAT CCGGTGGTGG TCGGTCTGGG TGTCGGGATG
CGCTTCTGA
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| Protein sequence | MKHASRNRKR NRIGTAAIAA SLLFAGALAP QAHAAGDDAM SGIHAGDVLV RLRAISIMPN
VSTTQSLSAL NVGVNNAIVP ELDLTYMIRD NLGVELILGT SRHQVTSNIG GLGGVNVLPP
TLLLQYHFNH AGRIRPYVGA GLNYTLFYNN GLNAGGQSIS ITNHSWGPAL QAGVDVQVTK
SLFVNADIKK IWMHTDASLG GQPLGRLSID PVVVGLGVGM RF
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