| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2309 |
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| Symbol | |
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| ID | 6282264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2603555 |
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| End bp | 2604655 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642621866 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_001895932 |
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| Protein GI | 187924290 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.103433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0970832 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAC GGGTAGTGGG GCAAGTGGCG GCGCTGGTCT TGTGCGCGGC GCCGTGGTTG
ACGGCTGCTG CGAAAGACAC GCAGCTCAAC GTGTATAACT GGTCCGATTA CATCGCCAAG
GACACCATTC CGAACTTCAC CAAGCAGACC GGCGTCCAGG TCAAGTACGA CAACTACGAC
AGCGACGACA CGCTGCAAGC CAAGCTTCTC ACCGGCAATT CCGGCTACGA CATCGTCGTG
CCGACCAGCA ATTACGCCGG CAAGCAGATC GCCGCCGGCA TCTTCGCGCC GCTCGACAAG
TCGAAGCTGC CGAACCTGAA GTACCTCGAT CCTTCGCTGA TGGCGCTCGT CGCCGGCGCC
GATCCGGGCA ACAAGTTCAC AGTGCCCTGG GCCTACGGCA CGACCGGCCT CGGCTACAAC
GTCACCAAGG CACAGCAGAT TCTCGGCAAG AACGTGCCGC TCGATAGCTG GGACGTGCTC
TTCAAACCGG AAAACATTTC GAAGCTGAAG GCTTGCGGCG TGTCCGTGCT CGACGCGCCG
GACCAGATGT TCGCCGCCGC GCTGCATTAC ATCGGTAAAG ATCCGATGAG CACGAACCCG
GCCGACTACC GCGCCGCGCT CGACATGATG AAGAAGATCC GCCCGTACAT CACGCAGTTC
AACTCGTCGG GCTACATCAA CGACCTGGTC GGCGGCGACG TGTGCTTCGC GTACGGCTGG
TCGGGTGATG TCGTGATCGC CAAGCATCGC GCGGTCGAGG CGAAGAAGCC CTATAAGGTC
GAGTACTACA TTCCGAAGGG CGGCGCGCCG GTGTGGTTCG ACGTGATGGC GATTCCGAAG
GACGCGAAGA ACAAGGAAGC CGCGCTCGAG TGGATCAACT ACATCGAAAC GCCGCAGGTT
CACGCCGCGA TCACCAACGC CGTCTACTAC CCGAGCGCCA ACCTCGAAGC GCGCAAGTAC
GTGGACAAGG ACGTGGCGAA CGATCCGGCC GTGTATCCGC CGCCTGAAGT CATCAAGACC
CTGTTCCTGC TGAAGCCGTT GCCGCCGGAA ATCCAGCGGC TGCAGACGCG GCTGTGGACT
GAGTTCAAGT CCGGCCGCTG A
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| Protein sequence | MKRRVVGQVA ALVLCAAPWL TAAAKDTQLN VYNWSDYIAK DTIPNFTKQT GVQVKYDNYD
SDDTLQAKLL TGNSGYDIVV PTSNYAGKQI AAGIFAPLDK SKLPNLKYLD PSLMALVAGA
DPGNKFTVPW AYGTTGLGYN VTKAQQILGK NVPLDSWDVL FKPENISKLK ACGVSVLDAP
DQMFAAALHY IGKDPMSTNP ADYRAALDMM KKIRPYITQF NSSGYINDLV GGDVCFAYGW
SGDVVIAKHR AVEAKKPYKV EYYIPKGGAP VWFDVMAIPK DAKNKEAALE WINYIETPQV
HAAITNAVYY PSANLEARKY VDKDVANDPA VYPPPEVIKT LFLLKPLPPE IQRLQTRLWT
EFKSGR
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