| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2308 |
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| Symbol | |
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| ID | 6282263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2602296 |
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| End bp | 2603462 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642621865 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001895931 |
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| Protein GI | 187924289 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.380588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.151342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGTG ACCAGTCGGG CGCGCTGGCA GGGGCCGTCG CGCCGTCCCC GAGCCTGAAC
GCCGTTACGG GCGACGCCAC GGACAACTTC GTCCAGGTCG TCGATGTCGT GAAGAAGTTC
GGCGAGACCG TGGCGGTCAA GGGCGTCAAC CTGTCGGTGA AGAAGGGCGA ACTGTTCGCG
CTGCTCGGCA GTTCCGGCTG CGGCAAGTCG ACCTTGCTGC GCATGATGGC CGGGCTCGAA
AGCGTGAGCT CGGGCAAGAT TTTGATCGAC GGCGAAGACC TCGCGCAATT GCCGCCGTAC
CGTCGGCCGG TCAACATGAT GTTCCAGTCG TACGCGCTGT TTCCGCACAT GACGGTAGAA
GGAAACGTCG CCTTCGGTCT GAAGCAGGAA GGCGTGCCGA AGGCCGAACT GAAGGACCGC
GTGCAGACCG CGCTCGAACT CGTGCAGATG GGGCGCTTCG CGAAGCGCAA GCCGAATCAG
CTTTCCGGCG GTCAACAGCA GCGCGTGGCG CTCGCACGTT CGCTGGTCAA GCGGCCCAAG
CTGCTGCTGC TCGACGAGCC GATGTCCGCG CTCGACAAGC AGATCCGTCA GCGCACCCAG
ATCGAACTGG TCAACATTCT CGACAAGGTC GGCGTGACCT GCATGATGGT GACGCACGAT
CAGGAAGAAG CGATGACGAT GGCGGGCCGC CTTGCCGTGA TGAGCGAAGG CGAGATCGTG
CAGCTCGGCA CGCCGCACGA AGTGTACGAG TATCCGAATA GCCGTTTCTC GGCCGAGTTC
ATCGGCTCGA CGAATCTGTT CGAAGGCCAT ACGGTTGAAG ACGAGCCCGA TTACGTGTTC
ATCGAAACGC CGGACCTGCC GTGCCGCCTG TATGTGAGCC ACGGCATCAC CGGTCCGCTC
GGCATGCCGG TGACGATTTC GGTGCGCCCC GAGCGCATCG CGTTGACGCG CAAACCGCCT
GAGGGCGCCT ACAACTGGGG CAAGGGCGTC GTCACGAATA TCGCCTACAT GGGCGGCTAT
TCGCTTTATC ACGTGAAGCT CGAGGCCGGC AAAACCGTGA TCGCGAACGT GACCAGCCTC
GCGCTGACCG AGATCGATCC GCCTACGTGG GGCGACGAAG TGTACGTACG CTGGAGCGCA
TCGGCCGGTG TGGTGCTGAC GTCATGA
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| Protein sequence | MSSDQSGALA GAVAPSPSLN AVTGDATDNF VQVVDVVKKF GETVAVKGVN LSVKKGELFA
LLGSSGCGKS TLLRMMAGLE SVSSGKILID GEDLAQLPPY RRPVNMMFQS YALFPHMTVE
GNVAFGLKQE GVPKAELKDR VQTALELVQM GRFAKRKPNQ LSGGQQQRVA LARSLVKRPK
LLLLDEPMSA LDKQIRQRTQ IELVNILDKV GVTCMMVTHD QEEAMTMAGR LAVMSEGEIV
QLGTPHEVYE YPNSRFSAEF IGSTNLFEGH TVEDEPDYVF IETPDLPCRL YVSHGITGPL
GMPVTISVRP ERIALTRKPP EGAYNWGKGV VTNIAYMGGY SLYHVKLEAG KTVIANVTSL
ALTEIDPPTW GDEVYVRWSA SAGVVLTS
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