| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2306 |
|---|
| Symbol | |
|---|
| ID | 6283166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2600552 |
|---|
| End bp | 2601370 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642621863 |
|---|
| Product | Ornithine carbamoyltransferase |
|---|
| Protein accession | YP_001895929 |
|---|
| Protein GI | 187924287 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.237978 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.193759 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCGA ACCGGATTTT GCAGTTGATC GCTTTGGGGA TCGGTTTTCT GTTTCTGTAC
ATACCGATCG TGAGTCTGAT TGTGTATTCG TTCAACGAAT CGCAACTTGT TACGGTGTGG
ACGCGGTTTT CGACGCGCTG GTATGCGGCA TTACTGCAGG ATGACGAATT GATCGCGGCG
GCGTGGCTGT CGTTGCGGGT GGCTTTGTTG ACGGCGTTTG CTTCTGTTGT CATTGGAACG
TGGGCGGGCT TCGTGCTCGC GCGGATGGGG CGGTTTCGCG GCTTCACGTT ATATACGGGG
ATGATCAATG CGCCGTTGGT GATTCCAGAA GTGATTCAGG GGATTTCGCT GCTGTTGCTG
TTCATCGAAA TGGCCAAGTG GTTGGGATGG CCGGCCGGAC GCGGCATTTT CACGATCTGG
ATCGGGCATG TGATGCTGTG TATTTCTTAT GTGGCGATCA TCGTGCAGTC GCGGGTGAAG
GAATTGCATC CCTCGCTCGA AGAGGCGGCG CTGGATCTTG GGGCTACGCC GTTGCGCGTG
TTTTTCTTTA TTACGTTGCC GTTGATTTCT CAGGCGCTTG TTTCCGGGTG GCTGCTGTCG
TTCACCTTGT CGATCGATGA TCTGGTGCTG TCGGCGTTTT TATCTGGGCC TGGATCGACT
ACTTTGCCGC TCGTTGTTTT CTCGCGTGTT CGGCTGGGAC TGAATCCTGA GATGAACGCG
TTGGCTACGC TCTTTATTGC CGTGGTTACT GTTGGGGTGG TGGCGGCTAA TTATTTTATG
CAGCGGGCGG AGAGGAAACG GGCGGTGATG GCGGTTTGA
|
|---|
| Protein sequence | MKPNRILQLI ALGIGFLFLY IPIVSLIVYS FNESQLVTVW TRFSTRWYAA LLQDDELIAA
AWLSLRVALL TAFASVVIGT WAGFVLARMG RFRGFTLYTG MINAPLVIPE VIQGISLLLL
FIEMAKWLGW PAGRGIFTIW IGHVMLCISY VAIIVQSRVK ELHPSLEEAA LDLGATPLRV
FFFITLPLIS QALVSGWLLS FTLSIDDLVL SAFLSGPGST TLPLVVFSRV RLGLNPEMNA
LATLFIAVVT VGVVAANYFM QRAERKRAVM AV
|
|---|
| |