| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2294 |
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| Symbol | |
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| ID | 6281350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2584304 |
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| End bp | 2585839 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642621851 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_001895917 |
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| Protein GI | 187924275 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.703327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACTT TCATCTTCTC CCGATACTCG CGCGGCGCCG CCCTCACCGG CATGGCATGC
GCGCTCGCCG CGTGTTCGTT CGGGCCGAGC GGCGAGCCGC CCGCGATGCC GCAACCGGCC
CACTACGGAG CACAGGCGCA ACCGACGCAA ACCGTGCCAG CGCAAGGCGT CACCCAACAG
TTCGTGGTCG GCGCGAAGCC GGTGCCGGAG TGGTGGAAGC TGTATCGGTC GGACGCGCTG
AATGCGCTTG TCGATGAAGG CCTGCGCAAC AGCCCGACGC TCGCCGCGAC CGACAAGAGC
CTCGCCGCCG CGCGTGAGCA GTTGCGCGCG CAGATCGGCA GTTCGATGCT GCCGACCGTC
GACCTCGGCG GCCAGGCGAC CCGCAATCGC GCGCTGGCGA TCCCCGAGGC TGGACCGAAC
ACGTTTCTCT ACAACATCTT CGTCGGCCAA TTGCAGGCGC ACTATACGTT CGACCTGTTC
GGTGCCGCGC GTCTGGCCGA CGCCGCGCTC GCGGCGCGCG TCAACGTTCA GGCGTATCAG
TTCGACGCCG CGCGCCGCGC GCTGGCCGCC AACATCGTGA CGGCCGCGAT CACGAGCGCC
GCGCTTCATG CGCAGATCGA GACGACCGAA CGGCTCGTGA CGATCGCCAA CGATCAGGCC
CGCGACACAC AGCGGCGCTA TGCATTGGGT GCTGTTTCGC ATGCGGATCA GTTGAGCGCG
CAGCAAAGCG CGGCGAGTCT GTCGGCGAGT TTGCCGGGGC TGAAGCAGCA ATGGCTGAGC
ACGCGGCACG CGTTGGCGGT GCTGCTGGGC CGCACGCCGG ATGCGGCGCC GGATGATCTT
GAACTCGCGC AGTTGCGTGT GCCTGAGCAG GTGCCCGTGG TGGTGCCGTC AGAGTTGCTG
CGCGCGCGCC CGGACATCCA GGCCGCCGAT GCCGCCTTGA AGGCCGCGGC GGCCGACGTC
GGTGTCGCCA CCGCGCAGAT GTTCCCGAGT CTGTCATTGA GCGCGTCGAT GGGCCAGGGC
GGCTTTAGCT GGCCGGTGGC GCTCTCCGGC GCGGGCGCGA TCTGGAGCAT CGGTGCGTCG
CTGTCGCAGC CGCTGTTTCA TGGCGGCGCC CTGTTCGCGC AACGGCGTGC GGCGGTCGAT
ACCTACGATG CCACGGTCTC GCAGTACAAA CAGACGGTGT TGGCCGCGTT CCAGAATGTC
GCCGATACGC TCGCCGCGCT CGAGCACGAC TCGCAGGCGT TGGATGCCGC GAACATTGCG
GCGCGTTCGG CGCAAGGGAT CTTTGATGAG ACCTCGGGGC GTTATCGATT GGGGGCGTTG
CCCATCGCAT CAGCACGTTC GAGCGAGCAG CAGTTTCGCA ACGCGCAGCT CGATGAGATC
CGCTATACGA GCGCGCGTTT GACGGACACG GCGGCGTTGT TTCAGGCGAT GGGGAATCCG
CCGGTGGGGA CGGCGGCGGA TTCCGCAGCC GCTTCGACTG CGGCTTCGGC TTCGGCATCC
GCGATTCCTG CTGCAAACGC GGGCATCTCC GAATAG
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| Protein sequence | MATFIFSRYS RGAALTGMAC ALAACSFGPS GEPPAMPQPA HYGAQAQPTQ TVPAQGVTQQ
FVVGAKPVPE WWKLYRSDAL NALVDEGLRN SPTLAATDKS LAAAREQLRA QIGSSMLPTV
DLGGQATRNR ALAIPEAGPN TFLYNIFVGQ LQAHYTFDLF GAARLADAAL AARVNVQAYQ
FDAARRALAA NIVTAAITSA ALHAQIETTE RLVTIANDQA RDTQRRYALG AVSHADQLSA
QQSAASLSAS LPGLKQQWLS TRHALAVLLG RTPDAAPDDL ELAQLRVPEQ VPVVVPSELL
RARPDIQAAD AALKAAAADV GVATAQMFPS LSLSASMGQG GFSWPVALSG AGAIWSIGAS
LSQPLFHGGA LFAQRRAAVD TYDATVSQYK QTVLAAFQNV ADTLAALEHD SQALDAANIA
ARSAQGIFDE TSGRYRLGAL PIASARSSEQ QFRNAQLDEI RYTSARLTDT AALFQAMGNP
PVGTAADSAA ASTAASASAS AIPAANAGIS E
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