Gene Bphyt_2293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2293 
Symbol 
ID6281349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2581173 
End bp2584301 
Gene Length3129 bp 
Protein Length1042 aa 
Translation table11 
GC content65% 
IMG OID642621850 
Productacriflavin resistance protein 
Protein accessionYP_001895916 
Protein GI187924274 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.497633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CGCACGAAGA AGGACGCTTC AACCTGTCCG CATGGGCGCT GCGCCACCAG 
GCGCTGGTGG TTTTCCTGAT CGCGCTCGCG ACCGCGTTCG GCATCCTCGC CTATACGCGG
CTCGCGCAAT CCGAAGATCC GCCGTTCACG TTCCGCGTGA TGGTGATCCG CACCTTCTGG
CCGGGCGCCA CCGCGCGCCA GGTGCAGGAA CAGGTGACGG ACCGCATCGG CCGCAAATTG
CAGGAGACGC CCGCCATCGA TTTCGTGCGC AGCTACTCGC GCCCCGGTGA ATCGCTGATG
TTCTTCTCGA TGAAGGACTC GGCACCGGTC AAGGACGTAC CCGAGACCTG GTATCAGGTG
CGCAAGAAAG TCGGCGATAT CGCGGCGACG CTGCCGCAAG GCATTCAAGG CCCGTTCTTC
AACGACGAGT TCGGCGACGT CTACACCAAC ATCTACACAC TCGAAGGCGA CGGCTTTTCT
CCCGCGCAAC TGCACGACTA CGCGGACCAG TTGCGCACGG TGCTGCTGCG CGTGCCGGGC
GTCGCCAAGG TGGACTATTT CGGCGATCCG GACCAGCACA TTTACATCGA GATCGCCAAT
ACGCAACTCA CGCGCCTCGG CATCTCGCCG CAGCAACTCG GCCAGGCGAT CAATTCGCAG
AACAGCGTCT CGCAAGCCGG CACGCTGACC ACGGCCGACG ACCGCGTGTT CGTGCGCCCC
ACCGGCCAGT TCAAAGACGT CAACGCGCTC GCCGACACGC TGATCCGCAT CAACAACCGC
TCGTTTCGTC TTGGCGACAT CGCCACGATC AAACGCGGCT ACGACGACCC CGTTGTCACG
CAGATGCGTG CCGGCGGCAA GGCCGTGCTC GGCATCGGCG TGACGATGCA GCCGGGTGGC
GACGTGATCC GCCTCGGCAA GGCGCTCGAT CAGCAGATGG CGCAGTTGCG AAAGGCGCTG
CCCGCCGGCT TGCAACTGGT TGAAGTGTCG AGCATGCCGG ACGCGGTCGC GCGTTCGGTC
GACGACTTTC TCGAAGCCGT CGCCGAAGCG GTGGCGATCG TGCTGGTGGT CAGCCTGGTT
TCGCTCGGCC TGCGCACCGG CATGGTGGTC GTGATTTCGA TCCCGGTGGT GCTGGCCGTC
ACCGCGTTGT GCATGTATCT GTTCGACATC GGTCTGCACA AGGTGTCGCT CGGCACGCTT
GTGCTCGCGC TCGGACTGCT CGTCGACGAC GCGATCATCG CCGTCGAGAT GATGTCGGTG
AAGCTGGAAC AAGGCTGGAA CCGCACGCGC GCCGCGGCCT ATGCGTACAC CAGCACCGCT
TTTCCGATGC TGACCGGCAC GCTCGTTACA GTCTCCGGTT TTCTGCCGAT CGCACTGGCC
AAGTCGAGCA CCGGCGAATA CACGCGCTCG ATTTTCGAAG TATCGGCGAT CGCGCTGATC
GCCTCGTGGC TCGCCGCGGT CGTGCTGATT CCGCTGCTCG GCTATCACCT GCTGCCCGAG
CGCAAACGCG AGGCGCACGA AGCGCATCTG CCGGACGATC ACGAGCACGA CATCTACGAC
ACGCGTTTCT ACCGGCGCCT GCGCGGCTGG ATAGGCTGGT GCATCGAGCG GCGCTTCGTC
GTGCTGGCGA TTACGGTCGC GCTGTTCGCG CTGGCCATGG CGGGTTTCAC GCTGGTGCCG
CAGCAGTTCT TCCCGAGTTC GGACCGTCCC GAGTTGCTGG TGGACGTGCG CCTGCCCGAA
GGCGCGTCGT TCGAAGCCAC GCTGCGCCAG GCCCAGCGGC TCGAAAAAGC GCTGGTGGGC
CGCCCGGAAA TCGATCATAC GGTCGACTTC GTCGGCACTG GCGCGCCGCG TTTCTATCTG
CCGCTCGATC AGCAATTGCC GCAGCCCAAT TTCGCGCAGT TCGTGATCAC GGCGAAGTCG
GTGAAGGACC GCGAGAAGCT CGCGCAATGG CTCGAACCGG AATTGCGCAA CAACTTTCCG
GCAATTCGCA CGCGCCTGTC GCGCCTCGAG AACGGGCCGC CCGTCGGTTA TCCGGTGCAG
TTCCGCGTGA GCGGCGACGA TATCGCCACC GTGCGTTCGA TCGCCGAGCG CGTCGCCGCG
ACCCTGCGCG CGGACCGCGG CACCCGCAAC GTCCAGTTCG ATTGGGACGA ACCCGCCGAG
CGCTCGGTGC GCTTCGAAGT CGATCAGAAG AAAGCGCGTG AACTGGGCGT CAGCTCCGAC
GACATTTCGA GCTTCCTCGC GATGACACTC TCCGGCTACA CCGTCACCCA GTATCGCGAA
CGCGACAAAC TGATCAGCGT CGATCTGCGC GCGCCTAAAG CGGAGCGCGT CGACCCCGCG
CAACTGGTCA CGCTGGCCAT GCCCACGCCG AACGGTCCCG TGCCGCTCGG CACGCTGGGC
CACTTGCGCA ACGACCTCGA ATACGGCGTG ATCTGGGAAC GCGACCGTCA GCCGACCCTT
ACCGTGCAGT CCGACGTTGC GCCGGGCGCG CAAGGCATCG ACGTCACGCA TGCGGTGGAC
AAGGCGCTCG GTCCGATTCG CGCGGCCCTG CCGGTCGGCT ACCGGATCGA AATCGGCGGC
TCGGTTGAGG AAAGCGGCAA AGGCCAGACC TCGATCAATG CGCAGATGCC GATCATGATC
ATCGCCGTAC TCACGCTCCT GATGATCCAG CTGCAAAGTT TCGCGCGCGT GCTGATGGTC
GTGCTGACCG CGCCGCTCGG GCTGATCGGC GTGGTGCTCA CGCTGCTGCT GTTCGGCCAG
CCGTTCGGCT TTGTCGCGAT GCTCGGCGTG ATCGCGATGT TCGGCATCAT CATGCGCAAC
TCGGTGATTC TGGTCGATCA GATCGAACAG GACATTGCGT CGGGACATAA GCGTTTCGAT
GCGATCGTCG GCGCGACCGT GCGGCGCTTC CGGCCGATCA CGCTGACCGC GGCCGCCGCC
GTGCTCGCGC TGATTCCGCT CTTGCGCTCG AACTTCTTCG GCCCGATGGC GACCGCGCTG
ATGGGCGGCA TTACGAGCGC CACGATCCTC ACGCTGTTCT ATCTGCCCGC GCTGTACGCC
GTGTCGTTTC GCGTGCGTGC CGATGAACGC GAGCCGCAGA CGTCCGGTCC GAAGCATACG
GGGAATTGA
 
Protein sequence
MSTPHEEGRF NLSAWALRHQ ALVVFLIALA TAFGILAYTR LAQSEDPPFT FRVMVIRTFW 
PGATARQVQE QVTDRIGRKL QETPAIDFVR SYSRPGESLM FFSMKDSAPV KDVPETWYQV
RKKVGDIAAT LPQGIQGPFF NDEFGDVYTN IYTLEGDGFS PAQLHDYADQ LRTVLLRVPG
VAKVDYFGDP DQHIYIEIAN TQLTRLGISP QQLGQAINSQ NSVSQAGTLT TADDRVFVRP
TGQFKDVNAL ADTLIRINNR SFRLGDIATI KRGYDDPVVT QMRAGGKAVL GIGVTMQPGG
DVIRLGKALD QQMAQLRKAL PAGLQLVEVS SMPDAVARSV DDFLEAVAEA VAIVLVVSLV
SLGLRTGMVV VISIPVVLAV TALCMYLFDI GLHKVSLGTL VLALGLLVDD AIIAVEMMSV
KLEQGWNRTR AAAYAYTSTA FPMLTGTLVT VSGFLPIALA KSSTGEYTRS IFEVSAIALI
ASWLAAVVLI PLLGYHLLPE RKREAHEAHL PDDHEHDIYD TRFYRRLRGW IGWCIERRFV
VLAITVALFA LAMAGFTLVP QQFFPSSDRP ELLVDVRLPE GASFEATLRQ AQRLEKALVG
RPEIDHTVDF VGTGAPRFYL PLDQQLPQPN FAQFVITAKS VKDREKLAQW LEPELRNNFP
AIRTRLSRLE NGPPVGYPVQ FRVSGDDIAT VRSIAERVAA TLRADRGTRN VQFDWDEPAE
RSVRFEVDQK KARELGVSSD DISSFLAMTL SGYTVTQYRE RDKLISVDLR APKAERVDPA
QLVTLAMPTP NGPVPLGTLG HLRNDLEYGV IWERDRQPTL TVQSDVAPGA QGIDVTHAVD
KALGPIRAAL PVGYRIEIGG SVEESGKGQT SINAQMPIMI IAVLTLLMIQ LQSFARVLMV
VLTAPLGLIG VVLTLLLFGQ PFGFVAMLGV IAMFGIIMRN SVILVDQIEQ DIASGHKRFD
AIVGATVRRF RPITLTAAAA VLALIPLLRS NFFGPMATAL MGGITSATIL TLFYLPALYA
VSFRVRADER EPQTSGPKHT GN