| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2292 |
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| Symbol | |
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| ID | 6281348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2580025 |
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| End bp | 2581176 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642621849 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001895915 |
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| Protein GI | 187924273 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.516168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCGC AGTCCCATCC GTATCGTCAT CGCGCGCGCT TGCGGCGCGC CGCATTCGTA
CTGGTTCTGG CCGGCGTCGT CACGCTGGCC GCGTGTTCGA AGAAGGAAGC CGCGGCGCCC
GAGCCGCGTC CGGTGGTGGC CGTCGCCGTG CATGCGGACG GCAGCGCCAC GCAGGCGGCT
TCCTTGCCCG GCGAGGTGCA GGCGCGGTAT TCGACGCCGC TGTCGTTTCG CGTCGGCGGC
AAGATCGTCG AGCGGCGCGT TCGTCTCGGC GATGTGGTGA AAAACGGGCA GATCGTCGCC
CGCCTCGATC CGGCCGATCA GCAGAAGAAT GCCGCGAGCG CGCAGGCGCA ACTCGCCGCC
GCGCAGCACG CTCTCGTGTA TGCGAAGCAG CAACTAGATC GCGATCAGGC ACAGGCCAAA
GAGAACCTGA TCGCGCCCGC GCAACTCGAA CAGACCACCA ATGCGTACGC ATCCGCGCTC
GCGCAGCGCG ATCAGGCCGC GCAGCAGGCG GCGCTGTCGA AAGACCAGTT GCAATACACC
ACGCTCGCCG CCGATCACGC CGGCGTGATC ACCGCCGAAC AGGCCGACAC GGGCCAGAAC
GTCTCCGCGG GCCAGGCCGT CTACAACCTC GCGTGGAGCG GCGACATTGA CGTGGTATGC
GACGTGCCGG AAAGCGCGCT CGCCGCGCTC TCGGTCGGGC AAACCGCCAA CGTCACGCTC
GCCGCGTTGC CGGCGCGCAA ATTTACGGCG CGCGTGCGCG AACTGTCGCC CGCCGCCGAC
CCGCAAAGCC GCACCTATCG CGCCAAACTC ACGCTCGACA ATCCCGGTCC GGACGTGCGC
CTCGGCATGA CCGCGGATAT CGAACTCGCC GCGCCAGCTA ACGCCTCGGC CGGTCAGCAC
GGCTCGTTCA CTGTGCCCGC CACGGCCTTG TTCCATGACG GCACGCAGCC CGCCGTGTGG
ATCGTGCGCG CCGCGGATAA CGCGCTGGAA CTGCGCCGCG TAACGGTCAC GCGTTACAAC
GAACGCACCG TGGTAATCGG TCAAGGTCTC AAGGACGGCG AACGCGTCGT GCTGCAAGGC
GTGCATACGG TGACGGCCGG CGAAAAAGTC CGCGCGATCG CGTCGCTGCA TCCCGAGGAC
TTCGCTTCAT GA
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| Protein sequence | MRPQSHPYRH RARLRRAAFV LVLAGVVTLA ACSKKEAAAP EPRPVVAVAV HADGSATQAA
SLPGEVQARY STPLSFRVGG KIVERRVRLG DVVKNGQIVA RLDPADQQKN AASAQAQLAA
AQHALVYAKQ QLDRDQAQAK ENLIAPAQLE QTTNAYASAL AQRDQAAQQA ALSKDQLQYT
TLAADHAGVI TAEQADTGQN VSAGQAVYNL AWSGDIDVVC DVPESALAAL SVGQTANVTL
AALPARKFTA RVRELSPAAD PQSRTYRAKL TLDNPGPDVR LGMTADIELA APANASAGQH
GSFTVPATAL FHDGTQPAVW IVRAADNALE LRRVTVTRYN ERTVVIGQGL KDGERVVLQG
VHTVTAGEKV RAIASLHPED FAS
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