Gene Bphyt_2288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2288 
Symbol 
ID6283148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2577076 
End bp2577465 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content58% 
IMG OID642621845 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_001895911 
Protein GI187924269 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACG CTCAGGTCAC TCAACGGCCG TATCAGGCCA TTAATTTCGC GCAGAAACTG 
GGGCTCTTCA ACGACCAGTG GCAAGCACGC GTGGTCGCCG AAATGAACGA CTATCAGTTC
AAGCTCGTGC GAATCGAAGG GGACTTCATC TGGCACGAGC ACGCCGACAC CGATGAGACG
TTCATCGTGC TGGAGGGGCA ATTGCGCATC GACATGCGCG ATGGTTTCGT GCTGATTTCA
GCGGGGGAAA TGTTCGTGGT GCCGAAGGGC ATCGAGCACA AGCCGTACGC CGAACGTGAA
GTGAAGCTGC TGCTGATCGA GCCGCGCGGC GTGAAGAATA CCGGCGAGGA AATCAGCGAA
CGGACGGCGG CGAACGACGT CTGGATTTGA
 
Protein sequence
MSDAQVTQRP YQAINFAQKL GLFNDQWQAR VVAEMNDYQF KLVRIEGDFI WHEHADTDET 
FIVLEGQLRI DMRDGFVLIS AGEMFVVPKG IEHKPYAERE VKLLLIEPRG VKNTGEEISE
RTAANDVWI