Gene Bphyt_2287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2287 
Symbol 
ID6283147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2576058 
End bp2576960 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content67% 
IMG OID642621844 
Producttranscriptional regulator, AraC family 
Protein accessionYP_001895910 
Protein GI187924268 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAG AACCGGCTCC GTCGCTGCCG CGTTCCCAGC CGTTTTCCCC TTCGCACACG 
CTGTCGTCTG CCCAGAACAA GCGCGGTTCC GACTGGATCT ATCGCTCGCC GCAAACGGGC
GGCGCGAGCG GCATCGAACG GATCGAGGCG TTCTTTCATC AGGCCGGCTA CGCGATGCAT
CGCCACGATA CTTATGCGAT CGGCCGTACG CTGTCCGGCG TGCAGAGTTT TCGCTATCGC
GGCAGCACCC GCAACAGCTT GCCGGGCGGC ACGATGGTGC TGCATCCCGA CGAACCGCAC
GACGGCCAGG CCGGCACCGG CGACGGTTTC CACTACCGCA TGATCTATGT CGATCCGGCG
TTGTTCCAGC AGGCGCTCGG CGGCAAGCCG CTGCCGTTTC TGGAAGGCGG GCTGTCGAAC
GATCCGCGCC TGTTCGCCGC CACGCAAAGC CTGCTGCGCG CGATGGACAG CGCTATCGAT
CCGCTCGAAC AGGACAGCGC GCTCTACGAT CTGGCCGTCG CGCTCGACAC CGTGGCAGGC
GCACCGGATA CACCGCGTCC GGTGGATTAC CGCGCGTCGA CGCTGGCGCG AGACTACCTG
CTGGCGTCGC TCGATCGCGC CGTCACGCTC GATGAACTCG CTGCCGCGGC GGGCCGCGAC
CGTTGGAGTC TGTCGCGGGA TTTTCGCGCA CTGTTCGGCA CCAGCCCGCA TCGCTATCTG
ACCATGCGGC GACTCGATCT CGTGCGGCAA CTGGTGCTCA AGGGCGTGTC GCTCGCCGAC
GCCTCGGCGG CGAGCGGCTT CGCCGATCAG AGCCACATGA CGCGGCACTT CAAGCACGCC
TGGGGCGTCG CACCAGCGCA GTGGCTGAAG ATGCTCGGCT CGCCTTCGGC CGGCGCGCGC
TGA
 
Protein sequence
MSGEPAPSLP RSQPFSPSHT LSSAQNKRGS DWIYRSPQTG GASGIERIEA FFHQAGYAMH 
RHDTYAIGRT LSGVQSFRYR GSTRNSLPGG TMVLHPDEPH DGQAGTGDGF HYRMIYVDPA
LFQQALGGKP LPFLEGGLSN DPRLFAATQS LLRAMDSAID PLEQDSALYD LAVALDTVAG
APDTPRPVDY RASTLARDYL LASLDRAVTL DELAAAAGRD RWSLSRDFRA LFGTSPHRYL
TMRRLDLVRQ LVLKGVSLAD ASAASGFADQ SHMTRHFKHA WGVAPAQWLK MLGSPSAGAR