| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2277 |
|---|
| Symbol | |
|---|
| ID | 6283404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2564795 |
|---|
| End bp | 2566090 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642621834 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_001895900 |
|---|
| Protein GI | 187924258 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.783016 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCAT CGCTTGCGAT TCGCCGTTGG TGGACGATCA TGCCGATCGT ATTCATCACC
TACAGCCTCG CTTATCTGGA TCGCGCGAAC TACGGTTTCG CGTCGGCCGC CGGCATCAAC
CAGGATCTTG GCATCAGCAA GGGACTGTCG TCGCTGATCG GCGCGCTGTT CTTCCTCGGC
TATTTCTTCT TCCAGATTCC CGGCGCGATC TACGCGGAAC GCCGCAGCGT CAAGAAACTC
GTGTTCTGGA GCCTGATTCT GTGGGGCGCT TGCGCGTCGC TCACCGGCAT GGTCAGCAAT
ATCCCCTCGC TGATGGTGAT CCGCTTCGTG CTCGGCGTGG TCGAAGCCGC GGTGATGCCG
GCCATGCTGA TCTTTATCAG CAACTGGTTT ACCAAGAGCG AGCGCTCGCG CGCCAACACG
TTCCTGATTC TCGGCAATCC GGTGACGGTG CTGTGGATGT CGGTGGTGTC GGGCTATCTG
GTGCATTCGT TCGGCTGGCG CCACATGTTC ATTGCCGAGG GCGCGCCCGC GATTCTCTGG
GCCGTGTGCT GGTGGTTCAT CGTGAAGGAC AAGCCGCAAC AGGTGTCGTG GCTCACGCAG
CAGCAGAAGG ACGACCTCGC CGAAACGCTG CGCGCCGAGC AGGCCGCGAT CAAGCCGGTG
CGCAACTACA GCGACGCGTT CAAAACGCCT GCGGTGATCA AGCTGTGCGC GCAATATTTC
TGCTGGAGCA TCGGCGTGTA TGGTTTCGTG CTGTGGCTGC CGTCCATCTT GAAGAACGGT
TCGACGCTCG GCATGGTCGA AACCGGCTGG CTCTCGGCGC TGCCTTATCT TGCCGCGACT
ATCGCGATGC TTGCAGCTTC GTGGGCATCG GATAAACTCA ACCGCCGCAA GGTCTTCGTG
TGGCCGTTCC TGCTGGTCGG CGCGGTCGCG TTCGCGGCGT CGTACGCGCT CGGCTCCACG
CATTTCTGGC TCTCGTATGC CTTGCTGGTG ATCGCCGGCG CCGCGATGTA CGCACCGTAT
GGCCCGTTCT TCGCGATCGT GCCGGAACTG CTGCCGAAGA ACGTCGCGGG CGGCGCGATG
GCGCTGATCA ACAGCATGGG CGCGCTCGGT TCGTTCGTCG GCTCGTATGT GGTCGGCTAT
CTGAACGGCG CGACCGGTTC GCCCGCCGCG TCGTATGCAT TCATGAGCGT GGCGCTCGTC
ACCGCCGTGA TTCTGACGCT GATCGTCAAA CCGCAGCAGC AGGAAAGCAG CAATGCGGCC
ACCGCACGCC ACCCCGTCGC AAGGAAAATA AGCTGA
|
|---|
| Protein sequence | MTSSLAIRRW WTIMPIVFIT YSLAYLDRAN YGFASAAGIN QDLGISKGLS SLIGALFFLG
YFFFQIPGAI YAERRSVKKL VFWSLILWGA CASLTGMVSN IPSLMVIRFV LGVVEAAVMP
AMLIFISNWF TKSERSRANT FLILGNPVTV LWMSVVSGYL VHSFGWRHMF IAEGAPAILW
AVCWWFIVKD KPQQVSWLTQ QQKDDLAETL RAEQAAIKPV RNYSDAFKTP AVIKLCAQYF
CWSIGVYGFV LWLPSILKNG STLGMVETGW LSALPYLAAT IAMLAASWAS DKLNRRKVFV
WPFLLVGAVA FAASYALGST HFWLSYALLV IAGAAMYAPY GPFFAIVPEL LPKNVAGGAM
ALINSMGALG SFVGSYVVGY LNGATGSPAA SYAFMSVALV TAVILTLIVK PQQQESSNAA
TARHPVARKI S
|
|---|
| |