Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2255 |
Symbol | |
ID | 6282994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2539085 |
End bp | 2540815 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642621812 |
Product | SpoVR family protein |
Protein accession | YP_001895878 |
Protein GI | 187924236 |
COG category | [S] Function unknown |
COG ID | [COG2719] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.895608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAACG AGCACCTGCA CAACGAAGCG CGCGGCGAGC CGGAGAACGG CGCGCCGGAG CGCGGGAAAG GCGTGCCGCA GCAGCAACAG TCGGGGCATG CCGAGGCAAG GGCGGACGAT ACCGGAACCG CCGCAGCCGG AGCAGTCCAC ACCGCTGCAG CACGGGGACA CACCGGAACG CCCACTCAGG GGCAAAGGGA AGTCCGTATG AACGTAGCCG ATAGACGGCC TCTGCCGTGC CCGTCCGACT GGACCTTCGA ATTGATCGAA GAGTACGACT CGCATATTGC CCGTGTTGCA GAGCAATATG AACTCGACGT GTATCCGATC CAGCTCGAAC TCATCAGCGC CGAACAGATG ATGGATGCGT ACGCGTCCGT CGGTATGCCG GTGAACTACC GTCACTGGTC GTTCGGCAAA CACTTTCTCT CCACCGAAAA AAGCTACCGT CGCGGGCAGA TGGGGCTGGC GTACGAGATC GTCATCAATT CGAACCCCTG CATCGCGTAT CTGATGGAAG AGAACACGAT GACGATGCAG GCGCTCGTCA TCGCCCATGC GGCCTACGGC CACAACTCGT TCTTCAAGGG CAACTATCTG TTCCGGCTGT GGACGGATGC GCACGCGATC ATCGACTACC TCGTGTACGC GAAGAATTAC ATCGCGGAGT GCGAGGAGCG TTTCGGGCTC GACCGGGTCG AGGAACTGCT CGATTCCTGC CACGCGTTGA TGAACTATGG CGTGGACCGT TACAAGCGTC CGCAGAAGCT GTCGCTGCAA AAGGAGTTTG CAGCGCGCCG TGAACGCGAG GCCTATCTGC AGTCGCAGGT GAACGAATTG TGGCGCACCT TGCCGACCCG GCATACGCCG TTGCCGGAGG AAGTCGAGGA GCGCTATCCG CCGGAGCCGC AGGAAAATCT GCTGTATTTC GCGGAGAAAA ACGCGCCGCT GCTGGAGCCG TGGGAGCGGG AAGTGATCCG CATCGTGCGC AAGGTCGGCC AGTATTTCTA TCCGCAACGG CAGACCCAGG TGATGAACGA GGGCTGGGCG ACCTTCTGGC ACTACACCTT GCTCAACACC ATGTACAACC AGGGCAAGCT GGAAGACGGC TTCATGATGG AGTTTCTCCA TTCGCACAGC AACGTGGTCT ATCAGCCGCC GGTCACGAAG CCGTACTACA GCGGCATCAA TCCGTACGCG CTCGGTTTTT CGATGATGAG CGACATTCGC CGCATCTGCG AAACGCCCAC GGAAGAAGAC CGCAAGTGGT TCCCGGAACT GGCGGGCAGT CCGTGGCTCC CGGCCATGCA CTACGCGATG CGCAACTTCA AGGACGAGAG TTTCGTCGCG CAGTATCTGT CGCCGCATCT GATCCGCGAA ATGCGCCTCT TCTCGGTGCT CGACGACGAC ATGCGCGACG CGCTCGAAGT CTCGGCGATT CACGACGACA GCGGCTATCA GTACGTGCGT CAGGCGTTGT CGCGGCAGTA CGACATGCAT CACCGCGAGC CGAACATTCA GGTGTGGGCG GTGAATACGC GTGGCGACCG GAGTTTGACG CTACGGCACT TCATGAGCGA CAACCGGCAT CTCTCCGGCG ATAGCGACGA AGTGCTCAAG CACATGGCGC GGCTGTGGCA GTTCGACGTG TATCTGGAAA GCGTCGATGA GAACGGCACG GTTCGCAAGC GCTACGAGTG CCGCTATGTG CCGCCTGCAG TGAGAGTGTG A
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Protein sequence | MTNEHLHNEA RGEPENGAPE RGKGVPQQQQ SGHAEARADD TGTAAAGAVH TAAARGHTGT PTQGQREVRM NVADRRPLPC PSDWTFELIE EYDSHIARVA EQYELDVYPI QLELISAEQM MDAYASVGMP VNYRHWSFGK HFLSTEKSYR RGQMGLAYEI VINSNPCIAY LMEENTMTMQ ALVIAHAAYG HNSFFKGNYL FRLWTDAHAI IDYLVYAKNY IAECEERFGL DRVEELLDSC HALMNYGVDR YKRPQKLSLQ KEFAARRERE AYLQSQVNEL WRTLPTRHTP LPEEVEERYP PEPQENLLYF AEKNAPLLEP WEREVIRIVR KVGQYFYPQR QTQVMNEGWA TFWHYTLLNT MYNQGKLEDG FMMEFLHSHS NVVYQPPVTK PYYSGINPYA LGFSMMSDIR RICETPTEED RKWFPELAGS PWLPAMHYAM RNFKDESFVA QYLSPHLIRE MRLFSVLDDD MRDALEVSAI HDDSGYQYVR QALSRQYDMH HREPNIQVWA VNTRGDRSLT LRHFMSDNRH LSGDSDEVLK HMARLWQFDV YLESVDENGT VRKRYECRYV PPAVRV
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