Gene Bphyt_2255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2255 
Symbol 
ID6282994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2539085 
End bp2540815 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content60% 
IMG OID642621812 
ProductSpoVR family protein 
Protein accessionYP_001895878 
Protein GI187924236 
COG category[S] Function unknown 
COG ID[COG2719] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.895608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACG AGCACCTGCA CAACGAAGCG CGCGGCGAGC CGGAGAACGG CGCGCCGGAG 
CGCGGGAAAG GCGTGCCGCA GCAGCAACAG TCGGGGCATG CCGAGGCAAG GGCGGACGAT
ACCGGAACCG CCGCAGCCGG AGCAGTCCAC ACCGCTGCAG CACGGGGACA CACCGGAACG
CCCACTCAGG GGCAAAGGGA AGTCCGTATG AACGTAGCCG ATAGACGGCC TCTGCCGTGC
CCGTCCGACT GGACCTTCGA ATTGATCGAA GAGTACGACT CGCATATTGC CCGTGTTGCA
GAGCAATATG AACTCGACGT GTATCCGATC CAGCTCGAAC TCATCAGCGC CGAACAGATG
ATGGATGCGT ACGCGTCCGT CGGTATGCCG GTGAACTACC GTCACTGGTC GTTCGGCAAA
CACTTTCTCT CCACCGAAAA AAGCTACCGT CGCGGGCAGA TGGGGCTGGC GTACGAGATC
GTCATCAATT CGAACCCCTG CATCGCGTAT CTGATGGAAG AGAACACGAT GACGATGCAG
GCGCTCGTCA TCGCCCATGC GGCCTACGGC CACAACTCGT TCTTCAAGGG CAACTATCTG
TTCCGGCTGT GGACGGATGC GCACGCGATC ATCGACTACC TCGTGTACGC GAAGAATTAC
ATCGCGGAGT GCGAGGAGCG TTTCGGGCTC GACCGGGTCG AGGAACTGCT CGATTCCTGC
CACGCGTTGA TGAACTATGG CGTGGACCGT TACAAGCGTC CGCAGAAGCT GTCGCTGCAA
AAGGAGTTTG CAGCGCGCCG TGAACGCGAG GCCTATCTGC AGTCGCAGGT GAACGAATTG
TGGCGCACCT TGCCGACCCG GCATACGCCG TTGCCGGAGG AAGTCGAGGA GCGCTATCCG
CCGGAGCCGC AGGAAAATCT GCTGTATTTC GCGGAGAAAA ACGCGCCGCT GCTGGAGCCG
TGGGAGCGGG AAGTGATCCG CATCGTGCGC AAGGTCGGCC AGTATTTCTA TCCGCAACGG
CAGACCCAGG TGATGAACGA GGGCTGGGCG ACCTTCTGGC ACTACACCTT GCTCAACACC
ATGTACAACC AGGGCAAGCT GGAAGACGGC TTCATGATGG AGTTTCTCCA TTCGCACAGC
AACGTGGTCT ATCAGCCGCC GGTCACGAAG CCGTACTACA GCGGCATCAA TCCGTACGCG
CTCGGTTTTT CGATGATGAG CGACATTCGC CGCATCTGCG AAACGCCCAC GGAAGAAGAC
CGCAAGTGGT TCCCGGAACT GGCGGGCAGT CCGTGGCTCC CGGCCATGCA CTACGCGATG
CGCAACTTCA AGGACGAGAG TTTCGTCGCG CAGTATCTGT CGCCGCATCT GATCCGCGAA
ATGCGCCTCT TCTCGGTGCT CGACGACGAC ATGCGCGACG CGCTCGAAGT CTCGGCGATT
CACGACGACA GCGGCTATCA GTACGTGCGT CAGGCGTTGT CGCGGCAGTA CGACATGCAT
CACCGCGAGC CGAACATTCA GGTGTGGGCG GTGAATACGC GTGGCGACCG GAGTTTGACG
CTACGGCACT TCATGAGCGA CAACCGGCAT CTCTCCGGCG ATAGCGACGA AGTGCTCAAG
CACATGGCGC GGCTGTGGCA GTTCGACGTG TATCTGGAAA GCGTCGATGA GAACGGCACG
GTTCGCAAGC GCTACGAGTG CCGCTATGTG CCGCCTGCAG TGAGAGTGTG A
 
Protein sequence
MTNEHLHNEA RGEPENGAPE RGKGVPQQQQ SGHAEARADD TGTAAAGAVH TAAARGHTGT 
PTQGQREVRM NVADRRPLPC PSDWTFELIE EYDSHIARVA EQYELDVYPI QLELISAEQM
MDAYASVGMP VNYRHWSFGK HFLSTEKSYR RGQMGLAYEI VINSNPCIAY LMEENTMTMQ
ALVIAHAAYG HNSFFKGNYL FRLWTDAHAI IDYLVYAKNY IAECEERFGL DRVEELLDSC
HALMNYGVDR YKRPQKLSLQ KEFAARRERE AYLQSQVNEL WRTLPTRHTP LPEEVEERYP
PEPQENLLYF AEKNAPLLEP WEREVIRIVR KVGQYFYPQR QTQVMNEGWA TFWHYTLLNT
MYNQGKLEDG FMMEFLHSHS NVVYQPPVTK PYYSGINPYA LGFSMMSDIR RICETPTEED
RKWFPELAGS PWLPAMHYAM RNFKDESFVA QYLSPHLIRE MRLFSVLDDD MRDALEVSAI
HDDSGYQYVR QALSRQYDMH HREPNIQVWA VNTRGDRSLT LRHFMSDNRH LSGDSDEVLK
HMARLWQFDV YLESVDENGT VRKRYECRYV PPAVRV