Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2254 |
Symbol | |
ID | 6282993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2537497 |
End bp | 2538801 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642621811 |
Product | metabolite/H+ symporter, major facilitator superfamily (MFS) |
Protein accession | YP_001895877 |
Protein GI | 187924235 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.795839 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC TAACCGACCA AACCGTGGCC TCGGCTCACG ACACCCGGCG CCGCATCTTC GCGATCGTTG GCGCTTCATC GGGCAATCTC GTCGAGTGGT TCGACTTTTA CGTGTATTCG TTCTGTGCGC TGTATTTCGC GCCGGCGTTC TTCCCGAGCG GCAACACCAC CACGCAATTG CTCAACACGG CGGGCGTGTT CGCCGCCGGC TTCCTGATGC GTCCGATCGG CGGCTGGTTC TTCGGCCGCC TCGCCGACAA GCACGGCCGC CGCACCGCCA TGATGGTGTC GGTGTTCATG ATGTGCGGCG GCTCACTCGT GATCGCCGTG CTGCCCACTT ACGCGCAGAT CGGCGCGCTG GCGCCGGCGC TGCTGCTGGT CGCGCGGCTG TTCCAGGGCT TGTCGGTGGG TGGCGAGTAC GGCACCAGCG CGACCTACAT GAGTGAAGTC GCGCTCAAGG GCCGGCGCGG TTTCTTCGCA TCGTTCCAGT ACGTCACGCT GATCGGCGGG CAGTTGTGTG CGCTGCTGGT GCTGGTGGTG CTGCAACAAA CGCTCTCCAA CGATGAACTG AAAGCATGGG GCTGGCGCGT GCCGTTCGCA ATCGGCGCGG TTGCGGCACT GGTCGCGCTG TATCTGCGTA AATCGCTCGA CGAAACCACC ACCGCCGAAA CCCGTCAGCG CAAAGAAGCC GGCACGCTGC GCGGCCTGTG GCTGCACAAA GGCGCGTTCA TGACCGTGCT CGGTTTCACG GCCGGTGGCT CGCTGATTTT CTACACGTTC ACCACCTACA TGCAGAAGTA CCTGGTCAAC ACGGCCGGCA TGCACGCCAA GACGGCCAGC AACGTGATGA CCGCGGCGCT CTTCGTCTAC ATGGTGATGC AGCCGGCGTT CGGCGCGTTG TCGGACCGCA TCGGCCGCCG TCGTTCCATG CTGTTCTTCG GCTTCTTCGC GACCATCGGC ACCGTGCCGC TGCTGCACGC GCTGAAAGAC GTGACGAGCC CTTATGCGGC CTTCGGTCTG GTCGTGGTGG CGCTGGCGAT CGTCAGTTTC TATACGTCGA TCAGCGGCCT GATCAAGGCG GAAATGTTCC CGCCGGAAGT GCGTGCGCTC GGCGTGGGGC TTTCATACGC GGTGGCGAAT GCGATCTTCG GCGGCTCGGC CGAGTATGTG GCGCTGTGGC TGAAGTCGGT CGGCAACGAG TCGATTTTCT ACTGGTACGT GACCGCGCTG TGCGCGATTG CCGGCATCGT TTCGCTGCGG ATGCGCGATC CGTCGAAAGA AGGGTATTTG CGTCTGGAGC CTTGA
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Protein sequence | MTDLTDQTVA SAHDTRRRIF AIVGASSGNL VEWFDFYVYS FCALYFAPAF FPSGNTTTQL LNTAGVFAAG FLMRPIGGWF FGRLADKHGR RTAMMVSVFM MCGGSLVIAV LPTYAQIGAL APALLLVARL FQGLSVGGEY GTSATYMSEV ALKGRRGFFA SFQYVTLIGG QLCALLVLVV LQQTLSNDEL KAWGWRVPFA IGAVAALVAL YLRKSLDETT TAETRQRKEA GTLRGLWLHK GAFMTVLGFT AGGSLIFYTF TTYMQKYLVN TAGMHAKTAS NVMTAALFVY MVMQPAFGAL SDRIGRRRSM LFFGFFATIG TVPLLHALKD VTSPYAAFGL VVVALAIVSF YTSISGLIKA EMFPPEVRAL GVGLSYAVAN AIFGGSAEYV ALWLKSVGNE SIFYWYVTAL CAIAGIVSLR MRDPSKEGYL RLEP
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