Gene Bphyt_2254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2254 
Symbol 
ID6282993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2537497 
End bp2538801 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content63% 
IMG OID642621811 
Productmetabolite/H+ symporter, major facilitator superfamily (MFS) 
Protein accessionYP_001895877 
Protein GI187924235 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00883] metabolite-proton symporter 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.795839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC TAACCGACCA AACCGTGGCC TCGGCTCACG ACACCCGGCG CCGCATCTTC 
GCGATCGTTG GCGCTTCATC GGGCAATCTC GTCGAGTGGT TCGACTTTTA CGTGTATTCG
TTCTGTGCGC TGTATTTCGC GCCGGCGTTC TTCCCGAGCG GCAACACCAC CACGCAATTG
CTCAACACGG CGGGCGTGTT CGCCGCCGGC TTCCTGATGC GTCCGATCGG CGGCTGGTTC
TTCGGCCGCC TCGCCGACAA GCACGGCCGC CGCACCGCCA TGATGGTGTC GGTGTTCATG
ATGTGCGGCG GCTCACTCGT GATCGCCGTG CTGCCCACTT ACGCGCAGAT CGGCGCGCTG
GCGCCGGCGC TGCTGCTGGT CGCGCGGCTG TTCCAGGGCT TGTCGGTGGG TGGCGAGTAC
GGCACCAGCG CGACCTACAT GAGTGAAGTC GCGCTCAAGG GCCGGCGCGG TTTCTTCGCA
TCGTTCCAGT ACGTCACGCT GATCGGCGGG CAGTTGTGTG CGCTGCTGGT GCTGGTGGTG
CTGCAACAAA CGCTCTCCAA CGATGAACTG AAAGCATGGG GCTGGCGCGT GCCGTTCGCA
ATCGGCGCGG TTGCGGCACT GGTCGCGCTG TATCTGCGTA AATCGCTCGA CGAAACCACC
ACCGCCGAAA CCCGTCAGCG CAAAGAAGCC GGCACGCTGC GCGGCCTGTG GCTGCACAAA
GGCGCGTTCA TGACCGTGCT CGGTTTCACG GCCGGTGGCT CGCTGATTTT CTACACGTTC
ACCACCTACA TGCAGAAGTA CCTGGTCAAC ACGGCCGGCA TGCACGCCAA GACGGCCAGC
AACGTGATGA CCGCGGCGCT CTTCGTCTAC ATGGTGATGC AGCCGGCGTT CGGCGCGTTG
TCGGACCGCA TCGGCCGCCG TCGTTCCATG CTGTTCTTCG GCTTCTTCGC GACCATCGGC
ACCGTGCCGC TGCTGCACGC GCTGAAAGAC GTGACGAGCC CTTATGCGGC CTTCGGTCTG
GTCGTGGTGG CGCTGGCGAT CGTCAGTTTC TATACGTCGA TCAGCGGCCT GATCAAGGCG
GAAATGTTCC CGCCGGAAGT GCGTGCGCTC GGCGTGGGGC TTTCATACGC GGTGGCGAAT
GCGATCTTCG GCGGCTCGGC CGAGTATGTG GCGCTGTGGC TGAAGTCGGT CGGCAACGAG
TCGATTTTCT ACTGGTACGT GACCGCGCTG TGCGCGATTG CCGGCATCGT TTCGCTGCGG
ATGCGCGATC CGTCGAAAGA AGGGTATTTG CGTCTGGAGC CTTGA
 
Protein sequence
MTDLTDQTVA SAHDTRRRIF AIVGASSGNL VEWFDFYVYS FCALYFAPAF FPSGNTTTQL 
LNTAGVFAAG FLMRPIGGWF FGRLADKHGR RTAMMVSVFM MCGGSLVIAV LPTYAQIGAL
APALLLVARL FQGLSVGGEY GTSATYMSEV ALKGRRGFFA SFQYVTLIGG QLCALLVLVV
LQQTLSNDEL KAWGWRVPFA IGAVAALVAL YLRKSLDETT TAETRQRKEA GTLRGLWLHK
GAFMTVLGFT AGGSLIFYTF TTYMQKYLVN TAGMHAKTAS NVMTAALFVY MVMQPAFGAL
SDRIGRRRSM LFFGFFATIG TVPLLHALKD VTSPYAAFGL VVVALAIVSF YTSISGLIKA
EMFPPEVRAL GVGLSYAVAN AIFGGSAEYV ALWLKSVGNE SIFYWYVTAL CAIAGIVSLR
MRDPSKEGYL RLEP