| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2248 |
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| Symbol | |
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| ID | 6281525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2533046 |
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| End bp | 2533819 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642621805 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001895871 |
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| Protein GI | 187924229 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGAA TTTTTATTAC CGGTTCCGCC GATGGTCTCG GTCAAATGGC TGCCCGTCTA
CTTGTCGAGG CCGGCCATCA GGTGGTGTTG CATGCGCGCA GCGCGGCGCG CGCCGACCAG
GCGTTGCAAG CCGTGCCGCA AGCGCAAGCC GCGCTGGCCG GCGACCTGTC GAGCATCGCG
GCCACGGTGG CGCTCGCGGA GCAGGTCAAC CAGCTTGGCC GTTTCGACGC GGTGATCCAC
AACGCGGCGG TCGGCTATCA GGAGCCGCGG CGGGTCGCCA CCGTCGACGG CTTGCCGCAC
GTGTTCGCGG TCAATACGCT GGCGCCGTAC ATTCTCACCG CTTTGATCGA GAAGCCGAAG
CGGCTTGTCT ATCTGAGTTC GGGCCTGCAT CGCAGCGGCG ACGCGAGCCT CGACGATCTG
GCCTGGGAGC GGCGTCCCTG GCGAGGCGCG GCGGCGTACT CGGACTCGAA ACTGCACGAT
GCGTTGCTGG CGTTCGCGAT GGCGCGGCGC TGGCCGAGGG TGTTGTCGAA TGCGCTGGAG
CCGGGTTGGG TGGCGACGAA AATGGGTGGT CCGGGTGCAC CGGACGATTT GCAGGCCGCG
CCGAAAACTC AAGTGTGGCT CGCCGTCAGC GACGAGCCGG CGGCCACCGT CAGCGGCGCG
TATTTCTATC ACATGAAGCA GTGCGAAACA CACCCGGCTG TGCGCGACGT TGCCGTTCAG
GAGCGTTTGA TCGAGGCGTG CGCGGGATTT TCCGGCATCC GCTTGCCGGA TTGA
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| Protein sequence | MSRIFITGSA DGLGQMAARL LVEAGHQVVL HARSAARADQ ALQAVPQAQA ALAGDLSSIA
ATVALAEQVN QLGRFDAVIH NAAVGYQEPR RVATVDGLPH VFAVNTLAPY ILTALIEKPK
RLVYLSSGLH RSGDASLDDL AWERRPWRGA AAYSDSKLHD ALLAFAMARR WPRVLSNALE
PGWVATKMGG PGAPDDLQAA PKTQVWLAVS DEPAATVSGA YFYHMKQCET HPAVRDVAVQ
ERLIEACAGF SGIRLPD
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